Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02630 ATGGCCCCTCCAATGAAATCTGACTCACAGCTTGTCAATGGTGAAGTGCAACACCTTAGACAAGAAGAAGGAGACACCTTCATCTCTGCATTGAAATTGGTGAATACTCTTGTGTTCCCAATGACGTTGAATTCCGCCATTGATCTTGGCATTTTTGATGTCATGGCCAAAGAAGGTGAAGGTGCTAAGCTCTCCGCCAAGGACATCGCAGCTAAGCTTCGCAGCGAGAATCCGGAAGCACCCGCAATGCTGGATCGTATCCTTAGGCTTCTGGCAAGTCACTCTGTGGTTTATTGCTCTGTTGCTGAGGATAATCAGGTAGAGATGCTCTACAGTCTCACCCCTATGGCCTCTCAATATTTTGTCGCTGATGCTCAAGGTGTATCACTTGGGGCCGTGATGAAGTTAATTCATGACAAAGTCTTCTTGGAAAGTTGGCCTGAATTGAAAGGAGCTGTTATGGAAGGAGGGATACCATTCAACAGAGTTCATGGTATGCATGCCTTTGAGTATCCAAGCAAAGAACTAAGGTTCAATAAGGGTATTAATTTTGACCTGCCTCATGTCATACAACATGCTCCTGCGTATTCTGGGATTGAACATGTGGGAGGAGATATGTTTAAAAGTGTTCCACGAGGAGATGCCATTTTTATGAAGTGGATACTTCATGATTGGAGTGATGAACACTGTATAAAACTGTTGAAGAATTGCTATGATGCTATTCCTGGCGATGGGAAGGTGATTATTGTGGACTTCAATCTTCCTATTGTGCCCGAGACAAGTATGGCTGCTCAAACTGCTTACCAAGCTGATTTGTTAATGATGACTCAACACATTGGAGGGAAAGAGCGAACCAAACAAGAATTCTTGGAATTGGCAACAACTGCTGGATTTGGTGATGTCAAATTTGTTAGCCATATCTGTGGCACATGGATTATGGAGTTCCTCAAGTA 953 0.4365 MAPPMKSDSQLVNGEVQHLRQEEGDTFISALKLVNTLVFPMTLNSAIDLGIFDVMAKEGEGAKLSAKDIAAKLRSENPEAPAMLDRILRLLASHSVVYCSVAEDNQVEMLYSLTPMASQYFVADAQGVSLGAVMKLIHDKVFLESWPELKGAVMEGGIPFNRVHGMHAFEYPSKELRFNKGINFDLPHVIQHAPAYSGIEHVGGDMFKSVPRGDAIFMKWILHDWSDEHCIKLLKNCYDAIPGDGKVIIVDFNLPIVPETSMAAQTAYQADLLMMTQHIGGKERTKQEFLELATTAGFGDVKFVSHICGTWIMEFLK 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02630 317 Gene3D Vaccinia Virus protein VP39 180 304 IPR029063 -
Bva05g02630 317 Pfam Dimerisation domain 41 92 IPR012967 GO:0046983
Bva05g02630 317 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 180 317 - -
Bva05g02630 317 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 1 179 - -
Bva05g02630 317 PANTHER O-METHYLTRANSFERASE 1 179 IPR016461 GO:0008168
Bva05g02630 317 SUPERFAMILY "Winged helix" DNA-binding domain 23 118 IPR036390 -
Bva05g02630 317 Gene3D - 10 120 IPR036388 -
Bva05g02630 317 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 171 317 IPR016461 GO:0008168
Bva05g02630 317 Gene3D Vaccinia Virus protein VP39 123 177 IPR029063 -
Bva05g02630 317 PANTHER O-METHYLTRANSFERASE 180 317 IPR016461 GO:0008168
Bva05g02630 317 PIRSF O-mtase 8 180 IPR016461 GO:0008168
Bva05g02630 317 PIRSF O-mtase 178 317 IPR016461 GO:0008168
Bva05g02630 317 Pfam O-methyltransferase domain 180 298 IPR001077 GO:0008171
Bva05g02630 317 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 128 315 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02630 Bva-Chr5 21739593 21741106 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02630 30 317 Monolignol Biosynthesis Gene Families AT5G54160 43.860 2.46e-97 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02630 K13066 - gmx:100789402 382.874