Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02628 ATGGTCCCTACAATGAAACCTGATTCACAGCTTGTCAATGACCTTAAACGACAAGAAGGAGATAGAGATACCTTCATGTCCGCAATAAATTTGGTGAAATTTATTGTGTTCCCAATGACCTTGAATTCGGCGATTGAGCTTGGCGTTTTTTATGTCATGGCTAAAGAAGGTGAAGGCGCCAAACTCTCCTCCAAGGACATTGCAGCTAAGCTTTGCAGCAAGAACCCAGAAGCACCCACAATGCTGGATCGTATCCTTAGGCTTCTGGCAAGTCACTCCGTGGATTATTGCTCTGTTGCTGATGATGCTCAAGGTATATCATTGGGGACCTTTGTGAACTTGCTTCATGACAAGGTCTTCTTGGAAAGCTGGTTAGTTTCATTACTCttagaattatatta 401 0.4239 MVPTMKPDSQLVNDLKRQEGDRDTFMSAINLVKFIVFPMTLNSAIELGVFYVMAKEGEGAKLSSKDIAAKLCSKNPEAPTMLDRILRLLASHSVDYCSVADDAQGISLGTFVNLLHDKVFLESWLVSLLLELY 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02628 133 Gene3D - 8 111 IPR036388 -
Bva05g02628 133 SUPERFAMILY "Winged helix" DNA-binding domain 21 104 IPR036390 -
Bva05g02628 133 PANTHER CAFFEIC ACID O-METHYLTRANSFERASE 12 94 - -
Bva05g02628 133 Pfam Dimerisation domain 39 90 IPR012967 GO:0046983
Bva05g02628 133 PANTHER O-METHYLTRANSFERASE 12 94 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02628 Bva-Chr5 21727250 21727651 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02628 18 124 Monolignol Biosynthesis Gene Families AT5G54160 38.281 8.69e-19 79.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02628 K13066 - gmx:100789402 104.375