Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02614 ATGGTGTCACTCAAGCTCCAGAAGCGGCTCGCCGCGAGCGTGCTCAAGTGCGGGAGGGGGAAGGTTTGGCTCGACCCCAATGAAGTAAACGAGATTTCCATGGCGAATTCGaGACAAAACATCAGAAAACTGGTCAAGGATGGTTTCATTATCAGGAAGCCAACAAAGATCCACTCTCGATCTCGTGCACGAAGAATGAAGGAGGCAAAGAGAAAGGGTCGTCACTCTGGATATGGTAAGCGTAAGGGTACTAGGGAGGCAAGGCTTCCAACAAAAATTCTGTGGATGCGTAGAATGCGTGTGTTGAGACGTCTCCTTTGCAAGTATCGTGAAgccaaaaaaattgacaagcACATGTACCATGACATGTACATGAAGGTAAAAGGTAATGTCTTTAAGAATAAGCGTGTTTTAATGGAGAGCATACATAAGTCCAAGGCTGAAAAGGCAAGAGAGAAAACATTATCTGACCAATTTGAGGCAAAGCGTGCTAAGAGTAAGGCAAGCAGGGAGAGAAAGTTGGCCAGGAAGGAGGAACGATTGGCACAGGGTCCTGGAGAAAGGGTACCTCCTGCAGCTTCAAAATCTCAGGCTGATTG 599 0.4574 MVSLKLQKRLAASVLKCGRGKVWLDPNEVNEISMANSRQNIRKLVKDGFIIRKPTKIHSRSRARRMKEAKRKGRHSGYGKRKGTREARLPTKILWMRRMRVLRRLLCKYREAKKIDKHMYHDMYMKVKGNVFKNKRVLMESIHKSKAEKAREKTLSDQFEAKRAKSKASRERKLARKEERLAQGPGERVPPAASKSQAD 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02614 199 PANTHER RIBOSOMAL PROTEIN L19 1 196 - -
Bva05g02614 199 Gene3D - 2 56 IPR015972 GO:0003735|GO:0005840|GO:0006412
Bva05g02614 199 Hamap 50S ribosomal protein L19e [rpl19e]. 3 149 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bva05g02614 199 MobiDBLite consensus disorder prediction 57 79 - -
Bva05g02614 199 CDD Ribosomal_L19e_E 4 167 IPR033935 GO:0003735|GO:0022625
Bva05g02614 199 Gene3D - 57 187 - -
Bva05g02614 199 ProSitePatterns Ribosomal protein L19e signature. 7 26 IPR023638 -
Bva05g02614 199 SMART Ribosomal_L19e_2 3 146 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bva05g02614 199 Pfam Ribosomal protein L19e 4 145 IPR000196 GO:0003735|GO:0005840|GO:0006412
Bva05g02614 199 PANTHER 60S RIBOSOMAL PROTEIN L19 1 196 IPR039547 GO:0003723|GO:0003735|GO:0022625
Bva05g02614 199 SUPERFAMILY Ribosomal protein L19 (L19e) 3 144 IPR035970 GO:0003735|GO:0005840|GO:0006412
Bva05g02614 199 MobiDBLite consensus disorder prediction 144 184 - -
Bva05g02614 199 MobiDBLite consensus disorder prediction 57 85 - -
Bva05g02614 199 MobiDBLite consensus disorder prediction 144 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02614 Bva-Chr5 21490743 21493627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02614 1 199 Cytoplasmic Ribosomal Protein Gene Family AT3G16780 85.075 5.59e-124 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02614 05 21490743 21493627 Bva05g02614 05 21490743 21493627 ECH