Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02612 ATGTCAAGGGGGAACCAAGATAAAAGGTTGGGTGCAGGACGTGTTGTGGCCGTGGCAATTGAGAATAACAAGACAAGCCAATATGCTGTAAAGTGGGCAATTGACAATCTCATGCCCAAAGACCAACATCTCAATCTCATCCATTGCAGACAAAGAACATCTTTAGCCAACGATGCCAACGATGATGTTGCGAGAGCATACTGGCAACAAGCTGAGACTGAATGCAAGGAACTCTTTGCTTCATTTCGTGTTTTCTGCAACCGGAAGAGTATCCCATGCAAGGAAATCTTAGTGGAGGACATGGATATACCCAAAGCAATAACAGAAGCCATTTCCACATATTCAATTGAGCTTCTCGTACTTGGGTCACCATCAAGGAGTGGCCTTATCAGAAGATTTAGGACAAACGATGTTCCCAGCCTTGTGTCAAAAGGGGCGCCACCATTCTGCACTGTGTATGTCATTTCCAAAGGAAAAATAGCAAGTGTCAAATCTGCTACTGCTCCACTGTCTAAGCCTCCAACACAACGTAACCAATTGCAGCCCCAACCTACCCCAACTCCTGATCGAATGGAAGCACCATCAATGAGAAACCCACCACCAACAAGAGCAGCAGAGAGGCTAGCATACAGGAGTACTCGCCAACAATCAGCTGATGATGAAATCAGATCACCGTTCACAAAAGGTGGTAGATTCAAATATGAGCCCTCAATGCTACCCGACTCTGATATATCATATGTGAGTAGCGGAAGACTAAGCACTAACCGgatatttccttctttataCGATCATATGGATACTGGAATACCCAATAGACTTTCAAATGGTTCAGATTCCAGTTATGGCTCATCTTTCTCAGCAAATAAATCAGTTGATAATAGTTCTCAGTTCGAGGACTTCTCATTCAGTTCGCAAGATAGTGGGATATCATCAATGAGGCTCTCCACAAGCAACAACATGGATGATATGGAAGTTGAGATGAGGAGGCTGAAGCTAGAATTGAAGCAAACAATGGAAATGTATAGCACGGCTTGTAAGGAAGCTCTTACAGCAAAGCAAAAGGCTAGTGGACTCCAGCGTTTGAAGTTGGAAGAACAAAAGAGATTTGAAGAAGCTGGAGAAACATCTCAAacaatgaggaaagaccagaAGAAGCCATCATCATTCGATGGTTTCTCATGTGTGAGGTATAGAAGATACACCATTGAGGAAATTGAAGAGGCAACAAAATCCTTTTCTCAATCTCTCAAGATTGGTGAAGGAGGTTATGGACCAGTATACAGAGGTGAACTAGATCACACTCCAGTGGCAATAAAAACTCTGAAGGCAGATGCAGCTCAAGGACTTTCACAGTTTCAGCAAGAGGTTGAAGTGTTAAGCTGCATAAGACATCCAAACATGGTTCTCCTGCTTGGGGCATGCCCAGAGTATGGTTGCCTAGTGTATGAGTACATGGCTCATGGAAGCTTGGATGACCGTCTATTCCGGAAAGGTAATACACCAGTTATTCCCTGGCAGCTAAGATTCAGAATCGCTGCAGAGATTGCCACTGGCCTCCTTTTCCTTCACCAGACAAAACCAGAGCCAATTGTTCACCGCGATCTCAAACCCGGCAACATTTTGCTAAACAGCAACTTTGTGAGCAAAATTAGTGATGTGGGATTGGCCAGGCTTGTCCCTCCTTCAGTGGCGGACTCTGTAACTCAGTATCACATGACAGCAACGGCTGGAACTTTCTGCTACATTGACCCAGAATACCAGCAGACGGGCATGCTTGGAATTAAATCTGATGTTTATTCATTGGGAATCATGCTTCTACAATTGATAACAGCAAAACCACCAATGGGTTTGACACATCATGTATCAAGAGCCATTGAGAGAGGCACTTTTGCTGAGATGCTTGACCCAGCTGTTGAAGATTGGCCAATTGATGAGGCCTTACACTTTGCCAAGCTTTCTCTACAGTGTGCAGAAATGAGGAGAAAAGATAGACCTGATCTTGGAAAAGTAGTCTTACCTTTGCTCAATAGACTAAGGGAATTTGCTGAACAAAACATGCCATTCATGATGTTTGGAGGTTTTGCACCTGCAGGATTCATTTCAGGAAGTAGCTACATTTCTTCCAGCACAATGTCCTCCTCCACGTCGCAGGATGCATTTAGTGACTACCAGACAGGAATGTCCGGATA 2189 0.4349 MSRGNQDKRLGAGRVVAVAIENNKTSQYAVKWAIDNLMPKDQHLNLIHCRQRTSLANDANDDVARAYWQQAETECKELFASFRVFCNRKSIPCKEILVEDMDIPKAITEAISTYSIELLVLGSPSRSGLIRRFRTNDVPSLVSKGAPPFCTVYVISKGKIASVKSATAPLSKPPTQRNQLQPQPTPTPDRMEAPSMRNPPPTRAAERLAYRSTRQQSADDEIRSPFTKGGRFKYEPSMLPDSDISYVSSGRLSTNRIFPSLYDHMDTGIPNRLSNGSDSSYGSSFSANKSVDNSSQFEDFSFSSQDSGISSMRLSTSNNMDDMEVEMRRLKLELKQTMEMYSTACKEALTAKQKASGLQRLKLEEQKRFEEAGETSQTMRKDQKKPSSFDGFSCVRYRRYTIEEIEEATKSFSQSLKIGEGGYGPVYRGELDHTPVAIKTLKADAAQGLSQFQQEVEVLSCIRHPNMVLLLGACPEYGCLVYEYMAHGSLDDRLFRKGNTPVIPWQLRFRIAAEIATGLLFLHQTKPEPIVHRDLKPGNILLNSNFVSKISDVGLARLVPPSVADSVTQYHMTATAGTFCYIDPEYQQTGMLGIKSDVYSLGIMLLQLITAKPPMGLTHHVSRAIERGTFAEMLDPAVEDWPIDEALHFAKLSLQCAEMRRKDRPDLGKVVLPLLNRLREFAEQNMPFMMFGGFAPAGFISGSSYISSSTMSSSTSQDAFSDYQTGMSG 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02612 729 CDD STK_N 15 158 - -
Bva05g02612 729 PANTHER OS02G0152300 PROTEIN 1 378 - -
Bva05g02612 729 Gene3D Transferase(Phosphotransferase) domain 1 485 687 - -
Bva05g02612 729 Coils Coil 313 340 - -
Bva05g02612 729 Pfam Protein kinase domain 414 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02612 729 MobiDBLite consensus disorder prediction 168 186 - -
Bva05g02612 729 ProSiteProfiles Protein kinase domain profile. 412 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02612 729 SMART serkin_6 412 675 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02612 729 SUPERFAMILY Protein kinase-like (PK-like) 388 671 IPR011009 -
Bva05g02612 729 MobiDBLite consensus disorder prediction 369 388 - -
Bva05g02612 729 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 16 138 - -
Bva05g02612 729 Gene3D Phosphorylase Kinase; domain 1 382 484 - -
Bva05g02612 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 530 542 IPR008271 GO:0004672|GO:0006468
Bva05g02612 729 Pfam Universal stress protein family 14 134 IPR006016 -
Bva05g02612 729 MobiDBLite consensus disorder prediction 166 202 - -
Bva05g02612 729 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 379 728 - -
Bva05g02612 729 MobiDBLite consensus disorder prediction 369 387 - -
Bva05g02612 729 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 1 378 - -
Bva05g02612 729 Gene3D HUPs 14 155 IPR014729 -
Bva05g02612 729 PANTHER OS02G0152300 PROTEIN 379 728 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02612 Bva-Chr5 21479040 21482395 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02612 8 693 Receptor kinase-like Gene Family AT1G78940 54.570 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva05g02612 Pkinase 8.6e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02612 - - gmx:100803837 949.888