Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02609 ATGGTTTTGGCACTTTTGGGACAAAATGTTAACCGCAATGAGCTATCCAACGATGCCACCGATGATGTTGCGAGAGCATATTGGCAACAAGCTGAGACTGAATGCAAGGAACTCTTTGCTTCATTTCGTGTTTTCTGCAACCGAAAGAGTATCCCATGCAAGGAAATCTTAGTGGAGGACATGGATATACCCAAAGCAATAACAGAAGCCATTTCCACATATTCAATTGAGCTTCTTGTACTTGGGTCGCCATCAAGGAGTGGCCTTATCAGAAGATTTAGGACAAATGATGTTCCCAGCCTTGTGTCAAAAGGGGCGCCACCATTCTGCACTGTGGATGTCATTTCCAAAGGAAAAATAGCAAGTGTCAAATCTGCTACTGCTCCACTGTCTAAGCCTCCAACACAACGTAACCAATTGCAGCCCCAACCTACCCCAACTCCTGATCTAATGGAAGCACCATCAATGCTAAACCCACCACCAAGAGCAGCAGAGAGGCTAGCATATGGGAGTACTCGCCAGCAATCAGCTGATGATGAAATCAGATCGCCGTTCACAAGAGGTAGTAAATTCAAATATGAGCCCTCAATGCTACCCGACTCTGATATATCATATGTGAGCAGCGGAAGACCAAGCACTGACCAgatatttccttctttataCGATCATATGGATACTGGAATACCCAATAGACTTTCAAATGGTTCAGATTCCAGTTATGACTCATCTTTCTCAGCAAATAAATCAGTTGATCATAGTTCTCAGTTCGGGGACTTCTCATTCAGTTCACAAGATAGTGGGATGTCATCAATGAGGCTCTCCACAAGCAACAACATGGATGATATGGAAGGTGAGATGAGGAGGCTGAAGTTAGAATTGAAGCAAACAATGGAAATGTATAGCACGGCTTGCAAGGAAGCTCTTACAGTAAAGCAAAAGGCTAGTGGACTCCAGTGTTTGAAGTTGGAAGAACAAAAGAGATTTGAAGAAGCTGGAGAAACATCTCAaagaatgaggaaagaccagaAGAAGCCATCATCATTCGATGGTTTCTCATGTGTGAGGTATAAAAGATACACCATTGAGGAAATTGAAGAGGCAACAAAATCCTTTTCTCAATCTCTCAAGATCGGTGAAGGAGGTTATAGACCAGTATACAGGAGTGAACTAGATCACACTCCAGTGGCAATAAAAACTCTGAAGGCAGATGCAGCTCAAGGACTTTCACAGTTTCAGCAAGAGGTTGAAGTGTTAAGCTACATAAGACATCCAAACATGGTTCTCCTACTTGGGGCATGCCCAAAGTATGGTTGCCTAGTGTATGAGTTCATGGCTCATGGAAGCTTGGATGACCGTCTATTCCGGAGAGGTAATACACCAGTTATTCCCTGGCAGCTAAGATTCAGAATCGCTGCAGAGATTGCCATTGGCCTCCTTTTCCTTCACCAGACAAAACCATA 1460 0.4267 MVLALLGQNVNRNELSNDATDDVARAYWQQAETECKELFASFRVFCNRKSIPCKEILVEDMDIPKAITEAISTYSIELLVLGSPSRSGLIRRFRTNDVPSLVSKGAPPFCTVDVISKGKIASVKSATAPLSKPPTQRNQLQPQPTPTPDLMEAPSMLNPPPRAAERLAYGSTRQQSADDEIRSPFTRGSKFKYEPSMLPDSDISYVSSGRPSTDQIFPSLYDHMDTGIPNRLSNGSDSSYDSSFSANKSVDHSSQFGDFSFSSQDSGMSSMRLSTSNNMDDMEGEMRRLKLELKQTMEMYSTACKEALTVKQKASGLQCLKLEEQKRFEEAGETSQRMRKDQKKPSSFDGFSCVRYKRYTIEEIEEATKSFSQSLKIGEGGYRPVYRSELDHTPVAIKTLKADAAQGLSQFQQEVEVLSYIRHPNMVLLLGACPKYGCLVYEFMAHGSLDDRLFRRGNTPVIPWQLRFRIAAEIAIGLLFLHQTKP 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02609 486 MobiDBLite consensus disorder prediction 126 153 - -
Bva05g02609 486 SUPERFAMILY Protein kinase-like (PK-like) 347 482 IPR011009 -
Bva05g02609 486 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 8 334 - -
Bva05g02609 486 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE-LIKE DOMAIN KINASE 337 486 - -
Bva05g02609 486 Gene3D HUPs 5 108 IPR014729 -
Bva05g02609 486 Gene3D Transferase(Phosphotransferase) domain 1 353 486 - -
Bva05g02609 486 PANTHER OS02G0152300 PROTEIN 8 334 - -
Bva05g02609 486 Coils Coil 272 299 - -
Bva05g02609 486 MobiDBLite consensus disorder prediction 128 146 - -
Bva05g02609 486 ProSiteProfiles Protein kinase domain profile. 371 486 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02609 486 PANTHER OS02G0152300 PROTEIN 337 486 - -
Bva05g02609 486 Pfam Protein tyrosine and serine/threonine kinase 375 484 IPR001245 GO:0004672|GO:0006468
Bva05g02609 486 CDD STK_N 11 118 - -
Bva05g02609 486 MobiDBLite consensus disorder prediction 168 193 - -
Bva05g02609 486 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02609 Bva-Chr5 21422925 21425843 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02609 29 486 Receptor kinase-like Gene Family AT1G78940 47.070 2.87e-132 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva05g02609 PK_Tyr_Ser-Thr 9.9e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02609 - - gmx:100803837 548.895