Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02564 ATGATTACCGCCAAGGATAAACTTGTGAAGTTTGTTTCTTTGGCCATTCCTACTTACTTATGGGTGTGGACTAGTTGGAGTAATATTCCGACCATGGCTAGCGACAGATTGAAGCCAGGAGATTTTCTGGACACCTCAGGCAAGCTGCTGTCCGAAAATGAAATATCTCGTATGTATTTTCACAACTTTTCTTATGCTGAAGGATTCACTTACTTGGAGATACGCAATAGGAATTCTCTAATATGGACTGCGACGATAAAGCAATCCATCCCCAGTGACTTTTCAGCAGTTCTAACTTTGGATCATTCCGggaaattaaagataatacACCAAGGTGGGGAACCGATAATCCTCTACTCTCCACCTCAAGCTATCAACTGCACTGTAGCCATCTTGTTGGATAATGGCAACTTTGTCCTCCAAGAACTTCATCCTAATGGATCAACAAAGAGGTTTTTATGGCAAAGCTTTGATTATCCTTCTGATACTCTTCTACCTGAGATGAAGTTAGGTGTTAACTACAAAACAGGTCATAGTTGGTCACTTGCTTCGTGGTTAACTAAAAGATATCCATCTCCaggttcttcttctttcaaacTTGAGTGGGATCCCAAATTTGGTGAATTAATTATCCGGAAAAGCGAACAAATTTACTGGAAAAGTGgggtatttaataaaaagattaatagatttgaaaattttccagaGGAAGCACAGAATCAATATGAATACATCATTGTCTCAAATGAAGACGAAGACTCATTCTCATTCCAAACACGACATGGCGATAAGGACGTCGCTACACTTTGGAATTTGATGTTTAATGGAGATATGAGAGATGCTAATGACAATCTTATTGCAAGGGCCAGTAATTGTTATGGGTATAACACTGATGGAGGCTGCCAAATATGGAACTTATCCAGTTGCAGACATAAGGGTCAAGTCTTCGTTCAATTAACTGGCTACTTTATTAATTCTTCATCTATCGCCACAGATTCAGATACTAGTCTTGGCATAAGTGATTGCAGAGCAACTTGCTGGAAAAAATGTGGCAACGATGCTTGTATTGGATATTGGCATTTGTCTCCTCAAAATGAAACTggttgcatttttatttatggaaaCTCATCTAGTCGGTTTATGAAAACAGCAGATGAATCAACTTACTTCGTtctaaaaaattctgaaatggAACACAAAGGTACAAAGAGATGGATCTGGGTTAGTGCTGTGATAGTTGGTGCACTACTGATGTCATGTGCAGGCATTATATATCTTGcgagaaaaagaaggaaagCACAAACGAAAACAACAGCGGATGCCGTGCATGATTTAGTCACTTTCTATGGGTCTGGAGATGTTAATGAACTCtcaaaagaagagaatggCCATGGTATAACGGTATTCAGCTATGCTTCTGTCTTAACAGCTACAGATAACTTCTCATCAGAAAATAAGTTGGGAGAAGGGGGATTCGGACCAGTTTACAAGggaaaattaaaaacaggAAAGGAAGTAGCTATCAAAAGACTTTCAAGAAGCTCAAGACAAGGttcaattgaatttaaaaatgagtTGACACTCATATCTGAACTTCAACATATGAATCTTGTTCAACTACTAGGTTGTTGTGTCCAAGGAGAGGAGAATATATTAATCTATGAATATATGCCTAATAAAAGTTTGGACTTCTTCTTATTTGATTCTTCTCAAAGCAATTTGTTAGATTGGAAGAAGCGTTTCAACATAATAGAAGGAGTAGCTCAAGGATTATTGTACCTACATAAGTACTCAAGACTTAAAATAGTGCACAGAGATTTAAAAGCTAGTAACATACTTCTTGATGAAAATATGAGCCCCAAGATTTCTGATTTTGGTTTAGCAAAAATATTCACCCAAGAATCAGGAGGAAACACTACAAGAATTGTTGGAACATATGGTTATATGTCGCCAGAATATGTTATGGAAGGAGCATTTTCTACTAAGTCAGATGTCTACAGTTTTGGAATCTTAATGCTTGAAATCGTTAGTGGTAGAAGAAACAACAGTTTCTATGATCCCAACAGCCCACTTAACTTAGTGGGATATGCATGGGATCTTTGGAAAGACGGCCTGGGGCTAGAGATGCTGGATCCATCAATGAATGGTTCATTCATTTCAGAGCAAGTGTTGAGATGCATTCATGTTGCCCTATTGTGTACACAAGAACGCCCGGTTGACCGGCCTTCCATGTCAGATGTTTTATCAATGTTGACAAATGAAAGCGCAGTGCTTCCGCTGCCTAAAAGACCAGCGTTTTACTTCAGAAAAATGAGCAATGTGGCAGCAGTATGTCTTCAGAAATCTGAAAATATTTCGAGAAATGACTTGTTTGTTTCAGATTTACAAGCAAGATA 2396 0.3589 MITAKDKLVKFVSLAIPTYLWVWTSWSNIPTMASDRLKPGDFLDTSGKLLSENEISRMYFHNFSYAEGFTYLEIRNRNSLIWTATIKQSIPSDFSAVLTLDHSGKLKIIHQGGEPIILYSPPQAINCTVAILLDNGNFVLQELHPNGSTKRFLWQSFDYPSDTLLPEMKLGVNYKTGHSWSLASWLTKRYPSPGSSSFKLEWDPKFGELIIRKSEQIYWKSGVFNKKINRFENFPEEAQNQYEYIIVSNEDEDSFSFQTRHGDKDVATLWNLMFNGDMRDANDNLIARASNCYGYNTDGGCQIWNLSSCRHKGQVFVQLTGYFINSSSIATDSDTSLGISDCRATCWKKCGNDACIGYWHLSPQNETGCIFIYGNSSSRFMKTADESTYFVLKNSEMEHKGTKRWIWVSAVIVGALLMSCAGIIYLARKRRKAQTKTTADAVHDLVTFYGSGDVNELSKEENGHGITVFSYASVLTATDNFSSENKLGEGGFGPVYKGKLKTGKEVAIKRLSRSSRQGSIEFKNELTLISELQHMNLVQLLGCCVQGEENILIYEYMPNKSLDFFLFDSSQSNLLDWKKRFNIIEGVAQGLLYLHKYSRLKIVHRDLKASNILLDENMSPKISDFGLAKIFTQESGGNTTRIVGTYGYMSPEYVMEGAFSTKSDVYSFGILMLEIVSGRRNNSFYDPNSPLNLVGYAWDLWKDGLGLEMLDPSMNGSFISEQVLRCIHVALLCTQERPVDRPSMSDVLSMLTNESAVLPLPKRPAFYFRKMSNVAAVCLQKSENISRNDLFVSDLQAR 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02564 798 ProSiteProfiles Protein kinase domain profile. 481 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02564 798 CDD STKc_IRAK 487 753 - -
Bva05g02564 798 Pfam D-mannose binding lectin 80 185 IPR001480 -
Bva05g02564 798 Gene3D - 29 157 IPR036426 -
Bva05g02564 798 ProSiteProfiles Bulb-type lectin domain profile. 34 153 IPR001480 -
Bva05g02564 798 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 188 IPR036426 -
Bva05g02564 798 SMART serkin_6 481 758 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02564 798 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 773 - -
Bva05g02564 798 ProSitePatterns Serine/Threonine protein kinases active-site signature. 602 614 IPR008271 GO:0004672|GO:0006468
Bva05g02564 798 ProSiteProfiles PAN/Apple domain profile. 309 395 IPR003609 -
Bva05g02564 798 SMART blect_4 34 160 IPR001480 -
Bva05g02564 798 Gene3D Transferase(Phosphotransferase) domain 1 557 758 - -
Bva05g02564 798 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 16 773 - -
Bva05g02564 798 Pfam Protein tyrosine and serine/threonine kinase 484 748 IPR001245 GO:0004672|GO:0006468
Bva05g02564 798 SUPERFAMILY Protein kinase-like (PK-like) 465 779 IPR011009 -
Bva05g02564 798 Gene3D Phosphorylase Kinase; domain 1 451 556 - -
Bva05g02564 798 PIRSF SRK 7 285 IPR024171 GO:0004674
Bva05g02564 798 PIRSF SRK 283 798 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02564 Bva-Chr5 20694730 20698129 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02564 400 773 Receptor kinase-like Gene Family AT4G05200 50.265 5.13e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva05g02564 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02564 - - vun:114168194 767.689