Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02551 ATGGAGATGGACATAGACCCACAAGAGCTGGAGCTGCTCGAATCAAATTATCGTCAACTTGAGGAAGACCTAGACTTGGACTCAAGGGAACCCTACCTTGAAGAAGACCTACAATCACCGCATGCGGTTCAATCACCACCATCACCAGATCTTCTGTCTCCATCGGAAGCTCAAATCAATTGCCAGAAACGGTTGCGATCGGATGGCCCAGATGGGTCAACCCCAGAAGCTGCGGCGTCGCCGTCACAGGAGAAAAGGAGCAGAATTGACAATTTGGCTCCAGAGGCTGACGAAGACTGGCTTCGATACTCGCCTCCCAGTGGAAACGATTCTGAAGAGGCAGAACAGGTATGCTTTGTGAAGGGGAAGACACTATCCAGGTATGCGTCGGAGATAGATGGAGAGTGTATGCCGGTCACTGCACCAGGTGGGAATAGGGTATACGCGAAAATGAATCGAATGGAAGGGGAGGAACGACTGAAGAAATTGGACATTAGAGCACAATCTCGTGATCTTATTTCAGAACCCATTAATGTTCTACTTGATAAACTGGATCAAGAGGCTTTTGATAAGGCTTTGAAAGCTAGTTCTGAAAGTCAAAGTGTTCCAGATGTACCTGAAACACCAATAGTCCATGAACAACTTTGGGTAGATAAATATGCCCCAAGATCATTTACTGAGCTTCTTAGTGATGAACAGACCAATCGTGAGGTACTCCTGTGGTTGAAACAATGGGATTCAAAGGTATTTGGATCTGAGATTCGAAGTACATCAGATGAGGTTTTGTCTTCTTTGAAACGGCATTCCTCTATTGCCCAACATCAGAAACCTTTGCATTCAAAGTTTCCAAGGATGAACAGAGGACCCAAGTGGAGTAACGGTGGATATAAACATTCTAGAAGTACGGATGATAGTGATGATTCAAAAAGCATTCAGGATACATGGAATAAAAAGGTCAAGCATATTGGGCCGCCAGAACAGAAGATCCTTCTGCTTTGTGGGCCACCGGGCTTTGGAAAAACTACACTTGCACATGTGGCTGCTAGACATTGTGGATATCACGTGGTGGAGGTTAATGCTAGTGATGATCGTTCTTCATCAACAATTGAAGCCAAAATCCTTGATGTGGTTGAGATGAACTCTGTCATGTCTGATTCAAGGCCTAAGTGTCTGGTGGTTGATGAAATTGATGGAGCGCTTGGTGATGGCAAGGGAGCAGTCGAGGTTCTCCTGAAAATGGTTACCGCTGAGAAAAAGTCTAAGGCAGGGAAGGAAAATTTGGCAAAAGAACAATTAGGAAGGAAGTCCTCAAAGAAGGGTCATAAAACAGCATCATTGTCAAGACCTGTGATTTGCATATGTAATGATTTATACGCACCTGCTTTGAGACCGTTACGTCAGGTTGCAAAGGTTCATATGTTTGTTCAACCAACAGTTAGTCGTGTAGTAAGCAGgcttaaatatatatgtaacaagGAGGGACTGAAAGCTTGTGCCATTGGACTTACTGCTTTGGCAGAGTATACAGAATGTGATATACGGTCTTGCTTGAATACTCTCCAATTTCTCagcaagaaaaaggaaacccTCAATGTGTTTGACATTGGTTCTCAAGTAGTTGGCAGAAAAGACATCTCAAGGAATGCTCTGGACATTTGGAAAGAGgttttccaaaagaaaagaataaagggGGAAACAAAATCTCGTAATACCATGTACTTTGAATTTGACTCATTGTACTCCCTTGTATCAAGCCGTGGTGATTATGACTTGATTCTGGATGGAATTCATGAAAACGTTTTGCAGCTCCATTATCATGACCCGATGATGCAGAAAACAGTCAAGTGCTTCAATAGTCTTGGAGTTTCTGATCTGATGCATCAACATATAATGCGGACACAACAAATGCCCCTTCTGGTTTATTTGCCCCCTGTTGCAATTACTGTACATCGTCTAGTAGCTCAAGTTCAAAAGCCAAATATTGAGTGGCCAAGGTCTTATCAAAGATATCGAACAATGATGACAGAAAAGATGGATATTTTGGACTCTTGGCACTCCAAAATTCCACCACATATTGCAACACATTTATCAGCTAGTTCTTTTGTAAAAGACTTGATTTCTCCATTGTTACATATTCTATCCCCGCCAACTATAAGACCGGTGGCCTCACAATTACTATCAGATAAAGAGAAGAATGACCTCACCGAATTAATTAGCAAAATGCTCTCTTACTCTGTAACATACAAGAATGTGCAATCAAATATACCGCCTAATAACCTGAGACATGAAGTCGCAGATGGTTCAGCATTGTGTTTTGATCCTCCAATCGGtgatttcataaattttaagGATTATACTTCAAATCATTATGTGCTTTCTTTAGCTATGAAGCAGGTTTTGTTGCATGAGGTTGAAAGGCAGAAGATCCTGCGAGTAAGTGCTGACAGAACAGTGCCATCAGGAACTGAATGTAGGCAAGGAGGGCATGAATTTATGGACACTGAAACTAGCAATGACCAATcagccaaaaaaaatcatgcaGCAGTAGTTACTGTAAAAAACATTGAAAGCGTGAAGAATGTCTTGGAAGCAAAGCAATTTAATGCGGACACTTCCATAGAATCACCAAATTTGGATCTCAATAAAGGTGCAGCTGACAATGTAAAACTGTTAAACGCaggaaatattaaaaagcCTCCAAGAAGTTCCGCAAGGTTTTTTGACAGGTTTATAAAGTTGAATAGCAAAGGTTctgaaaataatcataaagcTGCAACGAAAGAAGCAATCTTGGATAAAGATAGACGTCCTGtattgtttaaatataatgaGGGTTATACAAATGCAGTCAAAAGGCCTGTTCGAATTCGTGAATTTCTACTCTG 2885 0.399 MEMDIDPQELELLESNYRQLEEDLDLDSREPYLEEDLQSPHAVQSPPSPDLLSPSEAQINCQKRLRSDGPDGSTPEAAASPSQEKRSRIDNLAPEADEDWLRYSPPSGNDSEEAEQVCFVKGKTLSRYASEIDGECMPVTAPGGNRVYAKMNRMEGEERLKKLDIRAQSRDLISEPINVLLDKLDQEAFDKALKASSESQSVPDVPETPIVHEQLWVDKYAPRSFTELLSDEQTNREVLLWLKQWDSKVFGSEIRSTSDEVLSSLKRHSSIAQHQKPLHSKFPRMNRGPKWSNGGYKHSRSTDDSDDSKSIQDTWNKKVKHIGPPEQKILLLCGPPGFGKTTLAHVAARHCGYHVVEVNASDDRSSSTIEAKILDVVEMNSVMSDSRPKCLVVDEIDGALGDGKGAVEVLLKMVTAEKKSKAGKENLAKEQLGRKSSKKGHKTASLSRPVICICNDLYAPALRPLRQVAKVHMFVQPTVSRVVSRLKYICNKEGLKACAIGLTALAEYTECDIRSCLNTLQFLSKKKETLNVFDIGSQVVGRKDISRNALDIWKEVFQKKRIKGETKSRNTMYFEFDSLYSLVSSRGDYDLILDGIHENVLQLHYHDPMMQKTVKCFNSLGVSDLMHQHIMRTQQMPLLVYLPPVAITVHRLVAQVQKPNIEWPRSYQRYRTMMTEKMDILDSWHSKIPPHIATHLSASSFVKDLISPLLHILSPPTIRPVASQLLSDKEKNDLTELISKMLSYSVTYKNVQSNIPPNNLRHEVADGSALCFDPPIGDFINFKDYTSNHYVLSLAMKQVLLHEVERQKILRVSADRTVPSGTECRQGGHEFMDTETSNDQSAKKNHAAVVTVKNIESVKNVLEAKQFNADTSIESPNLDLNKGAADNVKLLNAGNIKKPPRSSARFFDRFIKLNSKGSENNHKAATKEAILDKDRRPVLFKYNEGYTNAVKRPVRIREFLL 961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02551 961 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 214 532 IPR027417 -
Bva05g02551 961 MobiDBLite consensus disorder prediction 267 311 - -
Bva05g02551 961 Pfam ATPase family associated with various cellular activities (AAA) 330 455 IPR003959 GO:0005524|GO:0016887
Bva05g02551 961 SMART AAA_5 326 480 IPR003593 -
Bva05g02551 961 Gene3D - 477 546 - -
Bva05g02551 961 Gene3D - 213 476 IPR027417 -
Bva05g02551 961 MobiDBLite consensus disorder prediction 15 36 - -
Bva05g02551 961 MobiDBLite consensus disorder prediction 422 441 - -
Bva05g02551 961 MobiDBLite consensus disorder prediction 819 843 - -
Bva05g02551 961 MobiDBLite consensus disorder prediction 1 115 - -
Bva05g02551 961 PANTHER P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASES SUPERFAMILY PROTEIN 1 961 - -
Bva05g02551 961 MobiDBLite consensus disorder prediction 297 311 - -
Bva05g02551 961 Coils Coil 10 30 - -
Bva05g02551 961 CDD AAA 325 414 - -
Bva05g02551 961 MobiDBLite consensus disorder prediction 41 62 - -
Bva05g02551 961 CDD HLD_clamp_RFC 477 535 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02551 327 535 Core DNA Replication Machinery Family AT5G22010 29.464 1.60e-13 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02551 K11269 - gmx:100785041 1273.07