Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02511 ATGACTAGTGAGGCTTCTGATACATTAGGCCAGCAATATAAAGACAACATGAAGGTTGGTTCTAGCGACAAAATCCCTTCAGACAGCGATGAAGACTATATATGTTCACAAACAGGTGAGGAATTTTCAGCTGAATTCTTAAGGGACCGAACTGTTTTAAGGAGAATACCTGTCATGACAGATGTGGATCAGCACCAGCTGAACAGATTGGgttataattttaaccaaAATCATCAGTTGGCTCACGAAGATCTTACACGTATTCTCAATGTAAGGAGAACGGATTCTGATGCTAAGTCAGATTTGTCAGAGTTTGCTCCAGCAACAGGACATGTTGAAGCGCAAAACTGGGCTTACCCTAGTACTTTGAACAGGAATAGGTGTGAGCATGGTGGTATAGGGCATTTAGTAGGCAATTTTTCTGAGGAAAGTTACTGTGATCAAGTTAGTCAAGGATCAGGACAAAATGCTATACCCATTTATCCAGTTGAGTCCCCTCAGTCATGCCTTCCTTATGTATCAACATTCTCAGACGATTCTTCTGCCAAAAAGATTAAGTGTCTTTGTAGCTTTGGTGGAACAATATGGCCAAGGCCAAATGATGGAAGGCTGAGATATGTGGGTGGAGAGACACGGATCATATCCCTCGGGGCAAACATCACCTGGGAGCAGCTTATGAGGAAGACTTATGCGATTTGTAATCAAATTCACACCATAAAGTACCAGCTTCCTGGTGAGGATCTTGATGCGCTTATTTCTGTGTCTTGTGATGAGGATCTTCTTCATATGATTGAAGAATATGAGGAGTTAGAAAGAGCTGGAGGTTCTCAACGGTTGCGGATTTTTCTCATTCCTTCAAGTGAACCTGAGAGCCCGAGTTCTATTGACGCAAAAGCCATTCAGCCAAGTGATACTGAATATCAGTATGTTGTTGCTGTTAATGGCATGCTGAATCCAAGTTCTAGGAATAGCTCATATGGGCAAAGTTTGGCAAGCCAAACAAGCCAGTATGGAAATACCTCTGATTACAATAGTCCAAGTTTCTGTATAGACACATCTCCATCTGCGTTTGCTTTTGAGGCAAAGGAGAGCATCCCAAAGTCAAATTTGGCAGGAACACCCTTGAAACCGGATCCTCAGTTTTATACCTCACTTTTGGTGCCAGGAAAGTCATTTAATCAATCATATCCTATTTCTCCTGTTTGTTTTCAACATAAAGAGCCTATAATTTCTGATGTACCGTTATTTTTGGATCAACCTAGCAATGCTAGTAATGAAAGCAGTTTTCCCTTTGTTATGGATAAAGTTCCATGTGACAATTCCTTGTATTCAGACAACACCAATTATATTGATCCCATTGCATACTATAGCAATCTAGCTGACGGGCATCCCATTGTAAATTACCACCCTAATAATCAATATGTGGTGGATGCTGACCTAGGAAAGAAGccagatgatgatgatgttcAATCTCACAAAAGAAGCCACAGTAAAGATTCTGTCTCTACTGCAATATCTAACCCAATTGATATGATGCCTGAGAGATTGATACTTACAAATGAAGGTTCATACTATTTTGACAATATTATCTCGTATCCTGAGGAGTCATCAGATTTTCTTTCAGTGTCTGCCGGTAAAGATGGATCTCATTTCAAACTCTTGAATGCACCTTCAGACCCACAATTGCAGGAGAATGATGAGAGATCTAAAAGTCACTCCCACTCCTCCCTGAAGAAAGAGACAGGAAAATTACCTTCTCTAAAATTGTCAAGTTCTATAGGAGAATTGGCATTGAATTTGGCAGAGGTAATTGTGAGTAAAAATAGAGTGCCAGAGTGTGAAATCATGCCCACTTCTGGAACCACTGAAAATTACAAGGGAATTTTAGTTACTCATCAAGAGAGCTTGCATTGTCCAACTAATGACAATACTAGTTCTGATTGTATGTGGAGACGTACTAAAGGAAATGCTGAAGAAACACCATGTGATATTTcctttgatataaaaaatttacagaaaaTCAACTACCAACTTGGTGATTGCTCATTTTCACCAGAATTGCATAGTAGTAAATGTAATATATCTGATGAACCATTTTTCTCTATAGAATCCCCAAGAAACTTGAGGGATCAACCACATGATCAGGAATTAGATATAATTGCTTCCGAGTTTCTCTTCAGGAGCCaaaattcatcaaaggatCTCCAATATGCTATGTTAGAAACAGAAAACAGTCAACCACCACTCCTCAAGCTCTCTGAGTTTCAACCTATTGAAGCTGAAACTGAAGTAGAGTCCATACAGCCCATCTTTAGTACAAACACCGGTGCTGCTTCACAAAGAGAGGGTGATCTTCTTGCAAAGGATCCCGAAAACTATCCTTCAGACAAGGACGGAAAGCCAGCCATTGACAAACAATCTTGTGTTGGACATAACTTTGGCAATCTGTTAAATGTGCAATCTCAGCCTTCTGATAGCTGTCAAGGAAATGAGAACCTAGAACCTATAGCTATTGTCAAAGGGCAAACGGATTGCATCTCTTCTACAGTACAGCCATCCTCAAAAGTTGCCTCAAACATAGATGAAGTGGCTGAAGATGCATCGACATCTTCAGGAACGGAAGTGGCAGAGAGTGCCAATCTAAACTCTGAAAGTGAGGTCGTAGGAGCTGATGGTAGAGACTCCAATGAGAATGTTGATGTAGCCACTGCTGAAAAAGAAGCTGAAATCTATGGCTTGCAGATTATTAAGAATGCTGATCTCGAAGATTTGCTAGAGTTGGGATCTGGAACATTTGGAACTGTCTATCATGGACATTGGAGGGGAACTGATGTTGCAATCAAGAGAATCAAAAGTAGTTGTTTTTCGGGCAGATTTTCAGAGCAAGAACGCCTAACTAAAGATTTCTGGAGAGAAGCACAGATTCTGTCAACTCTTCACCATCCAAATGTAGTGGCCTTTTATGGGGTTGTTGCAGATGGCCCTGGGGGAAGATTAGCAACAGTAACAGAATACATGATCAATGGATCACTGAGGAATGTCCTCTTGAGAAAGGAAAAGGTGCTTGATCGTCGAAAAAGGCTTATCATTGCAATGGATGCAGCCTTTGGCATGGAATATTTGCATCTGAAAAATAttgttcattttgatttgaagtgtgaaaatTTACTTGTCAATTTGGGGGATCTTGAACGACCTGTTTGCAAGGTTGGTGATTTCGGCCTATCAAGAATTAAACGCAACACACTTGTATCTGGTGGTGTCAGAGGAACCCTACCCTGGATGGCACCAGAATTATTAGATGGTAACAGAAGTAAGGTCTCTGAGAAGGttgatattttctcatttggTATCACAATGTGGGAAATCTTAACTGGAGAGGAACCGTATGAAAACATGCACTGTGGTGAAATCATAGGAGGGATTGTCAATAATACGCTGAGGCCTCCTATTCCAAAACGCTGTGATGCTGAATGGAAAAAAATGATGGAAGACTGCTGGAACGCTGATCCTGCAGCCAGGCCAGGCTTCACAGAAGTAGCAAATAGACTTCGCAACATGTTGGCTGCGCTGCCAAAAAGAAGACATAATGTAGCAAGAATTCGTTCAAGTTG 3614 0.3982 MTSEASDTLGQQYKDNMKVGSSDKIPSDSDEDYICSQTGEEFSAEFLRDRTVLRRIPVMTDVDQHQLNRLGYNFNQNHQLAHEDLTRILNVRRTDSDAKSDLSEFAPATGHVEAQNWAYPSTLNRNRCEHGGIGHLVGNFSEESYCDQVSQGSGQNAIPIYPVESPQSCLPYVSTFSDDSSAKKIKCLCSFGGTIWPRPNDGRLRYVGGETRIISLGANITWEQLMRKTYAICNQIHTIKYQLPGEDLDALISVSCDEDLLHMIEEYEELERAGGSQRLRIFLIPSSEPESPSSIDAKAIQPSDTEYQYVVAVNGMLNPSSRNSSYGQSLASQTSQYGNTSDYNSPSFCIDTSPSAFAFEAKESIPKSNLAGTPLKPDPQFYTSLLVPGKSFNQSYPISPVCFQHKEPIISDVPLFLDQPSNASNESSFPFVMDKVPCDNSLYSDNTNYIDPIAYYSNLADGHPIVNYHPNNQYVVDADLGKKPDDDDVQSHKRSHSKDSVSTAISNPIDMMPERLILTNEGSYYFDNIISYPEESSDFLSVSAGKDGSHFKLLNAPSDPQLQENDERSKSHSHSSLKKETGKLPSLKLSSSIGELALNLAEVIVSKNRVPECEIMPTSGTTENYKGILVTHQESLHCPTNDNTSSDCMWRRTKGNAEETPCDISFDIKNLQKINYQLGDCSFSPELHSSKCNISDEPFFSIESPRNLRDQPHDQELDIIASEFLFRSQNSSKDLQYAMLETENSQPPLLKLSEFQPIEAETEVESIQPIFSTNTGAASQREGDLLAKDPENYPSDKDGKPAIDKQSCVGHNFGNLLNVQSQPSDSCQGNENLEPIAIVKGQTDCISSTVQPSSKVASNIDEVAEDASTSSGTEVAESANLNSESEVVGADGRDSNENVDVATAEKEAEIYGLQIIKNADLEDLLELGSGTFGTVYHGHWRGTDVAIKRIKSSCFSGRFSEQERLTKDFWREAQILSTLHHPNVVAFYGVVADGPGGRLATVTEYMINGSLRNVLLRKEKVLDRRKRLIIAMDAAFGMEYLHLKNIVHFDLKCENLLVNLGDLERPVCKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLDGNRSKVSEKVDIFSFGITMWEILTGEEPYENMHCGEIIGGIVNNTLRPPIPKRCDAEWKKMMEDCWNADPAARPGFTEVANRLRNMLAALPKRRHNVARIRSS 1204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02511 1204 MobiDBLite consensus disorder prediction 478 504 - -
Bva05g02511 1204 MobiDBLite consensus disorder prediction 479 499 - -
Bva05g02511 1204 SMART PB1_new 199 286 IPR000270 GO:0005515
Bva05g02511 1204 SUPERFAMILY Protein kinase-like (PK-like) 912 1183 IPR011009 -
Bva05g02511 1204 SUPERFAMILY CAD & PB1 domains 200 289 - -
Bva05g02511 1204 Pfam PB1 domain 200 284 IPR000270 GO:0005515
Bva05g02511 1204 PRINTS Tyrosine kinase catalytic domain signature 1040 1058 IPR001245 GO:0004672|GO:0006468
Bva05g02511 1204 PRINTS Tyrosine kinase catalytic domain signature 1111 1133 IPR001245 GO:0004672|GO:0006468
Bva05g02511 1204 PRINTS Tyrosine kinase catalytic domain signature 1155 1177 IPR001245 GO:0004672|GO:0006468
Bva05g02511 1204 PRINTS Tyrosine kinase catalytic domain signature 1003 1016 IPR001245 GO:0004672|GO:0006468
Bva05g02511 1204 MobiDBLite consensus disorder prediction 1 18 - -
Bva05g02511 1204 ProSiteProfiles Protein kinase domain profile. 921 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02511 1204 Pfam Protein tyrosine and serine/threonine kinase 926 1184 IPR001245 GO:0004672|GO:0006468
Bva05g02511 1204 Gene3D Phosphorylase Kinase; domain 1 914 1008 - -
Bva05g02511 1204 PANTHER KINASE SUPERFAMILY WITH OCTICOSAPEPTIDE/PHOX/BEM1P DOMAIN-CONTAINING PROTEIN 97 1197 - -
Bva05g02511 1204 Gene3D - 205 286 - -
Bva05g02511 1204 MobiDBLite consensus disorder prediction 563 581 - -
Bva05g02511 1204 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1046 1058 IPR008271 GO:0004672|GO:0006468
Bva05g02511 1204 MobiDBLite consensus disorder prediction 866 897 - -
Bva05g02511 1204 ProSitePatterns Protein kinases ATP-binding region signature. 927 948 IPR017441 GO:0005524
Bva05g02511 1204 MobiDBLite consensus disorder prediction 551 582 - -
Bva05g02511 1204 SMART serkin_6 921 1188 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02511 1204 CDD STKc_MAP3K-like 927 1184 - -
Bva05g02511 1204 MobiDBLite consensus disorder prediction 1 31 - -
Bva05g02511 1204 CDD PB1_UP2 188 284 - -
Bva05g02511 1204 MobiDBLite consensus disorder prediction 866 885 - -
Bva05g02511 1204 Gene3D Transferase(Phosphotransferase) domain 1 1009 1202 - -
Bva05g02511 1204 PANTHER SERINE-THREONINE PROTEIN KINASE 97 1197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02511 Bva-Chr5 19767266 19775208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02511 37 325 MAP Kinase Kinase Kinase AT1G16270 38.047 5.17e-43 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-6 Bva05g02511 PK_Tyr_Ser-Thr 2.3e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02511 - - aprc:113872358 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02511 05 19767266 19775208 Bva05g02511 05 19767266 19775208 ECH