Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02494 ATGTCTCATGTGCGTGATCACGAGAGTGTAAAGATCATTGAGAGGTGTCAAGTTTCTCCACCACAAAACTCCATTCCCACAACCTCGATTCCTATCTCTTTCCTTGACATTCCATGGCTGTACATCTCCCCAATCCAACGCATTTTCTTCCATGAGTTTCCTTTTCCCACTCAAACCTTCCTGCAAACCCTAATTCCCAAACTCAAGCATTCTCTCTCAATCACTCTACAACACTTCATCCCCTTTGCCTCCAATCTAGTGTACCCTCCAAAGCCCCACTTCCCTTACTTCCTCTACCAAGATGGGGACTCCATTCCTTTCACCATCGCAGAATCCACTACAAATTTCGACCACCTCATATCTGACTCCCCCAAACATGTCACAGATTTGCACCCATTTGTTCCCACGCTGTTTTCACCTCATACCTCGGAGGATGGAACACGTTATATACCTCTCATGGCGATTCAGGTCACAATTCTACCCAACAATGGTTTTGCCCTTTGTGTTAGTTTCCACCATGTTGTTGGGGATGGTAGGGCATTTCATCATTTCATGAAATTCTGGTCCTCTCTTTGTAGCAAAAATGGGGATTCGACTTCCCTTGAAGCCTCAGTACCTCTTCCTTTCCATAACAGGGACATTATTCAAGATCCAAAAGGACTACTTAAGCTCAAAATGATGGAGAATATGTGGAATTCTCCAACTCCAAGCAAGGAATTTGCAGTTGTCTACACCGACATGGTTCGTGCTACATTTGTATTGAATCCTGACCAAATTGAGAGACTGAAGAAATGGGTCATTGCTAAATGCAGCAACAGTGATCATTTCAAGACTTTACACATATCAACCTTTGTGGTGACAAGTTCTTTGATTTGGGTTTGTTTTGTGAGATCAGAAGAGATCATAGGCTATGATGTTCCAAATGATGACGAACTCTACCACTTGATTTTTCTTGCAGATTGTAGAAACCATCATGAGGTTTCAATTCCTTCAACTTACTTTGGGAATTGCCTAGGCTATCGAACAGTGACAATGAAGAGAAGTGAATTAGTAGGTAATAATGCCATTGTTGAAGCTGTGAGAGCTATTGAATGCCAAGTTAGAGATGTGCAGAGTGACCCTTTCAAAGGGTTAGATACAATGACTCCAGAGCATGAAGGACGAGTAGTATCTGGGCATGGAGTTGTAATTGCAAGTTCACCAAAGCAGGGTGTGTATGAGACCAATTTTGGGTCGGGAAAACCTAAAATGACTGAGGTAGTTCATATTGACTCTTCAAAATCCATTGCCTTTTCTGATTGTAGAGACAATGAAGGTGGGGTTGAAGTTGGCTTAGCACTTGGAAGGATTCAGATGAATAATTTCACTTCCATCATGAAAAAGTACCTTTCAGATATTACCAATTTAAATCACTA 1415 0.4177 MSHVRDHESVKIIERCQVSPPQNSIPTTSIPISFLDIPWLYISPIQRIFFHEFPFPTQTFLQTLIPKLKHSLSITLQHFIPFASNLVYPPKPHFPYFLYQDGDSIPFTIAESTTNFDHLISDSPKHVTDLHPFVPTLFSPHTSEDGTRYIPLMAIQVTILPNNGFALCVSFHHVVGDGRAFHHFMKFWSSLCSKNGDSTSLEASVPLPFHNRDIIQDPKGLLKLKMMENMWNSPTPSKEFAVVYTDMVRATFVLNPDQIERLKKWVIAKCSNSDHFKTLHISTFVVTSSLIWVCFVRSEEIIGYDVPNDDELYHLIFLADCRNHHEVSIPSTYFGNCLGYRTVTMKRSELVGNNAIVEAVRAIECQVRDVQSDPFKGLDTMTPEHEGRVVSGHGVVIASSPKQGVYETNFGSGKPKMTEVVHIDSSKSIAFSDCRDNEGGVEVGLALGRIQMNNFTSIMKKYLSDITNLNH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02494 471 PANTHER - 7 467 - -
Bva05g02494 471 SUPERFAMILY CoA-dependent acyltransferases 131 215 - -
Bva05g02494 471 Gene3D - 5 237 IPR023213 -
Bva05g02494 471 PANTHER ANTHOCYANIN 5-AROMATIC ACYLTRANSFERASE 7 467 - -
Bva05g02494 471 Pfam Transferase family 9 459 - -
Bva05g02494 471 Gene3D - 243 466 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02494 Bva-Chr5 19638466 19639881 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02494 68 466 Monolignol Biosynthesis Gene Families AT5G48930 22.488 6.15e-12 65.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02494 - - gmx:100782335 511.916