Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02488 ATGCCCACCAAAAGGCaatctttcttctcttgtgCTCCTTCACTAGTcagttgctttcttttcttcactaTTCTTCTATGTAACCCTGCTTTCTCTGCTAACAATGaagcttctcttctcttttcatgGCTGCACATGTCTGCTTCACCACCCAGTTCATTTTTCTCCAACTGGAACATGCTTGACAGCAAACCCCTATTTCTAAGAAAACTTGTCGTTTCTGATGCAAATCTCACTGGACCCATCCCTGATGACATTGGTAATTGCTCTTCTCTCACAGTTATCGACCTTAGAGTAAATAATCTCATTGGCTCTATCCCTGCAAGTATTGGCAATCTCCAAAACCTGCAGCGTTTGATTTTGAACTCTAACCAGCTCAGTGGAGGAATCCCAGTTGAGCTAAGCAATTGCATTGGTCTAAAATCTCTCGTCCTTTATAGTAACAAGCTAGATGGCGTTATCCCACCAGTTCTAGGAAAATTGTCCAGACTTGCAGTTCTTCGTGTTGGGGCAAACATGGATATCACTGGGAAAATCCCAGATGAGCTAGGAAACTGCACCAATTTGACTCAACTGAGGCTTTCTTTAACTAGCATATCAGGTTCTATTCCATCTGAGCTTGGAAAGCTCCAGAAGCTGCAAACATTGCTTTTATTGGACAACAGTCTTTCTGGGGCTATTCCTGAGGAGATTGGCAATTGTACAAGCTTGAAATTCATTGAGTTTTCTCTCAATTCGTTATCTGGCGCTATCCCTTTGTCTATATGTGGTCTTTCAAAACTTGAAGgtttaatgattaatgataACAGCTTTTCTGGTTCTATACCTTCAAGTCTGTCAAATGTCACAAATCTGCAAAGCCTGGTacttaatagaaataaattttcaggTTTGATTCCACCAGAGCTTGGGATGTTGTCAAAGCTTTCTCTGCTGTATCTTTGGCAGAATCAACTTGAAGGAATCATTCCTTCTAGTTTGGCCAATTGTACTAACCTGCAATtccttgatttttcatttaatgaaCTTACTGGTGCCATTCCTGATGGTCTCTTTCAGCTTCAAAACCTCAAACTAATGCTCATAAAAAACAATGATATATCAGGTACAATACCACCAGGAATTGGTAATTGCAGCTCTCTTGAAAGGCTTTTGCTAGAAAATAATCACATTTATGGTGAGATTCCTAAAACAATTGGCAACCTCAAGAACTTAAACTATTGTGATGTTTCTTGGAACTACCTTTCTGGACCAGTTCCAGATGAGATGGGTAATTGTACAAAGCTGGAATTGTTAGACCTAAGCAACAACAGGTTAGAAGGTGCATTGCCTAGTTCATTGCAGTCATTATCTAAACTACAGAGTTTAAATGCATCTTTCAATGGGTTTTTGGGTCAAATACCAGCATTCCTGTGTCATATTGATTCCCTGGAAAAGCTAATTCTAAGCAGTAATTCCTTCTCTGGACCAATTCCTCTATCTCTCGGCCTATGTTTGCGTCTCAAAATGCTTGATCTTAGCAGCAATCAGCTGAATGGAAGCATCCCTGCAGAGCTTGGCCATATTCAAAGTCTTGGGATTGCTCTTAACCTTAGCTGCAATTCTCTCAGTGAGTCAATTCCAGCCCAAATTTCTGCACTCAAAAAACTCACAACACTGGACATTTCACATAACATGTTGGAGGGAAGTTTGTGTCCACTGGCAGGGCTAGTTAGTCTTGTCTCTCTTAATGTTTCTTGCAACAACTTCAATGGCTCTCTTCCTGACACTGACCTTTTCAGAGATTTATCAGCTAAAGAATTAAGGGGAAATCAAGGTCTGGATTATTCTCACCGCATCTCGTGCTTCTTAAGTGATTCAGTCCAGGCAGAATCAACAAGAAGTTCAAGGAAGTCTCTAATGCTTAAAGTTGCAATTGGATTGCTGGTAGTCTTGACAGTGGTATTGATAACTATAGGGATCATTTCTATAATAATGGCACAAAGAACAACTAGAGATGAAGATTCAGGAATGGGAAGTTCTTGGCCATGGCAGTTCATTCCATTTCAGAATCTAAATTTCTCAGTGGAGCAAATACTGAGATGTTTAGTAGACAGAAACATAATTGGAGAAGGATTCTTTGGTGTTGTGTACCGAGCTGACATGGATAATGGTCAAATCGTTGCTGTGAAGAAACTAAGGCCAGCAATAATGACTGCAGATGATGAATGTGAGCATGACAAAAGAGGAGTTCTTGACTCATTTACAGCAGAGGTGAAAACTCTTGGATCAATCCGACACAAGAACATTGTCAGATTCTTAGGTTGTTGTTGGAACAGATGCACAACATTGCTTATGTATGACTATATGCCAAATGGAAGCTTAGGTAGTTTACTCCATGAGAGTAATGGGGATTACTTGGAATGGGGACTAAGGTACAAAATCTTGTTAGGAGCTGCACAAGGCCTTGCATATCTACACCATGATTGTGTCCCTCCAATAGTCCACAGAGACATTAAACCTAATAACATCCTCATTGATAGCGATTTTGAAGCTCACATTGCTGACTTTGGCTTGGCTAAGTTGCTTGATGATAGTGATTTTGCCGGGTCCTCCGAAGGAATTGCTGGTTCTTATGGATATATAGCTCCTGAGTATGGCTACATGATGAAGATTACAAAGAAGAGTGATGTTTACAGTTTCGAGGTAGTTTTGCTTGAAGTCTTGATGGGCGAGCAACCAAATGATCCAACAATACCAGATGGGCTAAATGTGGTAGATTGGGTGAAACAGAAAAGGGGAGAAATTGAAGTACTCGACCCAAGATTACCATTTAAAACTGAATCGGAAATCAACGAAATGATGCAGGTATTAGGCATTGCACTATTATGTGTAAATTCTGTCCCAGGTGCAAGACCAGCAATGAAGGAAGTTGCAGCAATGCTCAAGGAAATCAAGCACGGAAGAGAGGAATATGCAGAAATAGAAGAACTTTTAAAGGGATCTTCAGCAATCGAAGCGCGTGAGAAGAAAGACTCTACTGGGATTGCTTCAACATCCTCGAAAGCACCAGCAACACAAAGCTTGAACCCCAATGGCAATGTCTG 3086 0.3934 MPTKRQSFFSCAPSLVSCFLFFTILLCNPAFSANNEASLLFSWLHMSASPPSSFFSNWNMLDSKPLFLRKLVVSDANLTGPIPDDIGNCSSLTVIDLRVNNLIGSIPASIGNLQNLQRLILNSNQLSGGIPVELSNCIGLKSLVLYSNKLDGVIPPVLGKLSRLAVLRVGANMDITGKIPDELGNCTNLTQLRLSLTSISGSIPSELGKLQKLQTLLLLDNSLSGAIPEEIGNCTSLKFIEFSLNSLSGAIPLSICGLSKLEGLMINDNSFSGSIPSSLSNVTNLQSLVLNRNKFSGLIPPELGMLSKLSLLYLWQNQLEGIIPSSLANCTNLQFLDFSFNELTGAIPDGLFQLQNLKLMLIKNNDISGTIPPGIGNCSSLERLLLENNHIYGEIPKTIGNLKNLNYCDVSWNYLSGPVPDEMGNCTKLELLDLSNNRLEGALPSSLQSLSKLQSLNASFNGFLGQIPAFLCHIDSLEKLILSSNSFSGPIPLSLGLCLRLKMLDLSSNQLNGSIPAELGHIQSLGIALNLSCNSLSESIPAQISALKKLTTLDISHNMLEGSLCPLAGLVSLVSLNVSCNNFNGSLPDTDLFRDLSAKELRGNQGLDYSHRISCFLSDSVQAESTRSSRKSLMLKVAIGLLVVLTVVLITIGIISIIMAQRTTRDEDSGMGSSWPWQFIPFQNLNFSVEQILRCLVDRNIIGEGFFGVVYRADMDNGQIVAVKKLRPAIMTADDECEHDKRGVLDSFTAEVKTLGSIRHKNIVRFLGCCWNRCTTLLMYDYMPNGSLGSLLHESNGDYLEWGLRYKILLGAAQGLAYLHHDCVPPIVHRDIKPNNILIDSDFEAHIADFGLAKLLDDSDFAGSSEGIAGSYGYIAPEYGYMMKITKKSDVYSFEVVLLEVLMGEQPNDPTIPDGLNVVDWVKQKRGEIEVLDPRLPFKTESEINEMMQVLGIALLCVNSVPGARPAMKEVAAMLKEIKHGREEYAEIEELLKGSSAIEAREKKDSTGIASTSSKAPATQSLNPNGNV 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02488 1028 PRINTS Leucine-rich repeat signature 547 560 - -
Bva05g02488 1028 PRINTS Leucine-rich repeat signature 429 442 - -
Bva05g02488 1028 Gene3D Ribonuclease Inhibitor 250 345 IPR032675 -
Bva05g02488 1028 MobiDBLite consensus disorder prediction 996 1028 - -
Bva05g02488 1028 Gene3D Ribonuclease Inhibitor 31 141 IPR032675 -
Bva05g02488 1028 MobiDBLite consensus disorder prediction 1009 1028 - -
Bva05g02488 1028 Pfam Leucine Rich Repeat 428 450 IPR001611 GO:0005515
Bva05g02488 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 827 839 IPR008271 GO:0004672|GO:0006468
Bva05g02488 1028 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 67 156 - -
Bva05g02488 1028 ProSiteProfiles Protein kinase domain profile. 696 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02488 1028 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 151 1002 - -
Bva05g02488 1028 Gene3D Ribonuclease Inhibitor 346 615 IPR032675 -
Bva05g02488 1028 Gene3D Ribonuclease Inhibitor 150 249 IPR032675 -
Bva05g02488 1028 Gene3D Phosphorylase Kinase; domain 1 682 782 - -
Bva05g02488 1028 ProSiteProfiles Leucine-rich repeat profile. 549 571 IPR001611 GO:0005515
Bva05g02488 1028 SMART LRR_typ_2 306 329 IPR003591 -
Bva05g02488 1028 SMART LRR_typ_2 330 354 IPR003591 -
Bva05g02488 1028 SMART LRR_typ_2 113 137 IPR003591 -
Bva05g02488 1028 SMART LRR_typ_2 570 595 IPR003591 -
Bva05g02488 1028 SMART LRR_typ_2 426 449 IPR003591 -
Bva05g02488 1028 SMART LRR_typ_2 210 234 IPR003591 -
Bva05g02488 1028 SUPERFAMILY RNI-like 71 465 - -
Bva05g02488 1028 Pfam Protein tyrosine and serine/threonine kinase 700 974 IPR001245 GO:0004672|GO:0006468
Bva05g02488 1028 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bva05g02488 1028 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 151 1002 - -
Bva05g02488 1028 SMART LRR_sd22_2 426 452 - -
Bva05g02488 1028 SMART LRR_sd22_2 547 569 - -
Bva05g02488 1028 SMART LRR_sd22_2 113 134 - -
Bva05g02488 1028 SMART LRR_sd22_2 330 359 - -
Bva05g02488 1028 Pfam Leucine rich repeat 308 367 IPR001611 GO:0005515
Bva05g02488 1028 Gene3D Transferase(Phosphotransferase) domain 1 783 998 - -
Bva05g02488 1028 ProSitePatterns Protein kinases ATP-binding region signature. 702 725 IPR017441 GO:0005524
Bva05g02488 1028 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 67 156 - -
Bva05g02488 1028 SMART serkin_6 696 979 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02488 1028 SUPERFAMILY L domain-like 425 589 - -
Bva05g02488 1028 SUPERFAMILY Protein kinase-like (PK-like) 673 975 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02488 Bva-Chr5 19564448 19568494 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02488 71 994 Receptor kinase-like Gene Family AT5G56040 42.437 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02488 PK_Tyr_Ser-Thr 1.9e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02488 - - mnt:21388116 1134.01