Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02480 ATGCCGACCAAAAGGCaatctttcttctcttgtgCTCCTTCACTAGTcagttgctttcttttcttcactaTTCTTCTATGTAACCCTGCTTTCTCTGCTAACAATGaagcttctcttctcttttcatgGCTGCACATGTCTGCTTCAACACCCAGTTCATTTTTCTCCAACTGGAACATGCTTGACAGCAACCCCTGTAACTGGAGCTCCATTACTTGTTCTCCTCAAGGTTTTGTCACAGAAATTAACATATTCTCTATCCCTCTTGAGTATTCTCTGCCTtccaatctctcttctttcagATTTCTAAGAAAACTTGTCGTTTCTGATGCAAATCTCACTGGACCCATCCCTGATGACATTGGTAATTGCTCTTTTCTCACAGTTATCGACCTTAGCGTAAATAATCTCATTGGCTCTATCCCTGCAAGTATTGGCAATCTCCAAAACCTGCAGCGTTTGATTTTGAACTCCAACCAGCTCAGTGGAGGAATCCCAGTTGAGCTAAGCAATTGCATTGGTCTAAAATCTCTCGTCCTTTATAGTAACAAGCTAGGTAGCGTTATCCCACCAGTTCTAGGAAAATTGTCTAGACTTGAAGTTCTTCGTGTTGGGGCAAACGTGGATATCACTGGGAAAGTCCCAGATGAGCTAGGAAACTGCACCAATTTGACTCAATTGAGGCTTTCTTTAACTAGCATATCAGGTTCTTTGCCAGCATCATTGGGTCAGCTTCAGAAGCTTCGGAATTTGTCTATCTATTCCACTATGATCTCTGGTGAAATTCCATCTGCTATAGGTAACTGGTCTGAAATTCTGCATTTATATCTTCATAAGAACAGTCTATCGGGTTCTATTCCATCTGAGCTTGGAAAGCTCCAGAAGCTGCAAACATTGCTTTTATTGGACAACAGTCTTTCTGGGTCTATTCCTGAGGAGATTGGCAATTGTACAAGCTTGAAATTCGTTGAGTTTTCTCTCAATTCGTTATCTGGCGCTATCCCTTTGTCTATATGTGGTCTTTCAGAACTTGAAGgtttaatgattaatgataACAGCTTTTCTGGTTCTATACCTTCAAGTCTGTCAAATGTCACAAATCTGCAAAGCTTGGCacttaatagaaataaattttcaggTTTGATTCCACCAGAGCTTGGGATGTTTTCAAAGCTTTCTCTGCTGTATTTTTGGCAGAATCAACTTGAAGGAGTAATTCCTTCTAGTTTGGCCAATTGTTCTAACCTGCAATtccttgatttttcatttaatgaaCTTACTGGTGCCATTCCTGATGGTCTCTTTCAGCTTCAAAACCTCAAACTAATGCTCATAAAAAACAATGATATATCAGGTACAATACCACCAGGAATTGGTAATTGCAGCTCTCTTGAAAGGCTTCTGCTAGAAAACAATCACATTTATGGTGAGATTCCTAAAACAATTGGCAACCTCAAGAACTTAAACTATTGTGATGTTTCTTGGAACTACCTTTCTGGACCAGTTCCAGATGAGATGGGTAATTGTACAAAGCTGCAATTGTTAGACCTAAGCAACAACAGGTTAGAAGGTACATTGCCTAGTTCATTGCAGTCATTATCTAAACTACAGAGTTTAAATGCATCTTTCAATGGGTTTTTGGGCCAAATACCAGCATTCCTGTGTCATATTGATTCCCTGGAAAAGCTAATCCTAAGCAGTAATTCCTTCTCTGGACCAATTCCCTCATCTCTCGGCCTATGTTTGCGTCTCAAAATGCTTGATCTTAGCAGCAATCAGCTGAATGGAAGCATCCCTGCGGAGCTTGGCCATATTCAAAGTCTTGGGATTGCTCTTAACCTTAGCTGCAATTCTCTCAGTGGGTCAATCCCAGCCCAAATTTCTGCACTCAAAAAACTCACAACACTGGACATTTCACATAACATGTTGGAGGGAAGTTTGTGTCCACTGGCAGGGCTAGTTAGTCTTGTCTCTCTCAATGTTTCTTGCAACAACTTCAATGGCTCTCTTCCTGACACTGACCTTTTCAGAGAGTTATCAGCTAAAGAATTAAGGGGAAATCAAGGTCTGGATTATTCTCACCGCATCTCGTGTTTCTTAAGTGATTCAGTCCAGGCAGAATCAACAAGAAGTTCAAGGAAGTCTCTAATGCTTAAAGTTGCAATTGGATTGCTGGTAGTCTTGACGGTGGTATTGAAAACTATAGGGATCATTTCTATAATAATGGCACAAAGAACAACTAGAGATGAAGATTCAGAAATGGGAAGCTCTTGGCCATGGCAGTTCATTCCATTTCAGAATCTAAATTTCTCAGTGGAGCAAATACTGAGATGTTTAGTAGACAGAAACATAATTGGAGAAGGATTCTCTGGTGTTGTGTACCAAGCTGACATGGATAATGGTCAAATCATTGCTGTGAAGAAACTAAGGCCAGCAATAATGACTGCAGATGATGAATGTGAGCATGACAAAAGAGGATTTCTTGACTCATTTACAACAGAGGTGAAAACTCTTGGATCAATCCGACACAAGAACATTGTCAGATTCTTAGGTTGTTGTTGGAACAGATGCACAACATTGCTTATGTATGACTATATGCCAAATGGAAGCTTAGGTAGTTTACTCCATGAGAGTAATGGGGATTCCTTGGAATGGGGACTAAGGTACCAAATCTTGTTAGGAGCTGCACAAGGCCTTGCATATCTACACCATGATTGTGTCCCTCCAATAGTCCACAGAGACATTAAACCTAATAACATCCTCATTGATCGCGATTTTGAAGCTCACATTGCTGACTTTGGCTTGGCTAAGTTGCTTGATGATAGTGATTTTGCCGGGTCCTCCAAAGGAATTGCTGGTTCTTATGGATATATAGCTCCTGAGTATGGCCACATGATGAAGATTACAAAGAAGAGTGATGTTTACAGTTTCGGGGTAGTTTTGCTCGAAGTCTTGACGGGCAAGCAACCAAATAATCCAACAATACCAGATGGGCTACATGTGGTAGATTGGGTGAAACAGAAAAGGGGAGAAATTGAAGTACTGGACCCAAGATTACCATTTAAAACTGAATCGGAAATCAACGAAATGATGCAGGTATTAGGCATTGCACTATTATGTGTAAATTCTGTCCCAGGTGCAAGACCAGCAATGAAGGAAGTTGCAGCAATGCTCAAGGAAATCAAGCACGGAAGAGAGGAATATGCAGAAATAGAAGAACTTTTAAAGGGATCTTCAGCAATCGAAGCACGTGAGAAGAAAGACTCTACTGGGATTGCTTCAACATCCTCAAAAGCACCAGCAACACAAAGCTTGAACCCCAATGGCAATGTCTG 3335 0.3934 MPTKRQSFFSCAPSLVSCFLFFTILLCNPAFSANNEASLLFSWLHMSASTPSSFFSNWNMLDSNPCNWSSITCSPQGFVTEINIFSIPLEYSLPSNLSSFRFLRKLVVSDANLTGPIPDDIGNCSFLTVIDLSVNNLIGSIPASIGNLQNLQRLILNSNQLSGGIPVELSNCIGLKSLVLYSNKLGSVIPPVLGKLSRLEVLRVGANVDITGKVPDELGNCTNLTQLRLSLTSISGSLPASLGQLQKLRNLSIYSTMISGEIPSAIGNWSEILHLYLHKNSLSGSIPSELGKLQKLQTLLLLDNSLSGSIPEEIGNCTSLKFVEFSLNSLSGAIPLSICGLSELEGLMINDNSFSGSIPSSLSNVTNLQSLALNRNKFSGLIPPELGMFSKLSLLYFWQNQLEGVIPSSLANCSNLQFLDFSFNELTGAIPDGLFQLQNLKLMLIKNNDISGTIPPGIGNCSSLERLLLENNHIYGEIPKTIGNLKNLNYCDVSWNYLSGPVPDEMGNCTKLQLLDLSNNRLEGTLPSSLQSLSKLQSLNASFNGFLGQIPAFLCHIDSLEKLILSSNSFSGPIPSSLGLCLRLKMLDLSSNQLNGSIPAELGHIQSLGIALNLSCNSLSGSIPAQISALKKLTTLDISHNMLEGSLCPLAGLVSLVSLNVSCNNFNGSLPDTDLFRELSAKELRGNQGLDYSHRISCFLSDSVQAESTRSSRKSLMLKVAIGLLVVLTVVLKTIGIISIIMAQRTTRDEDSEMGSSWPWQFIPFQNLNFSVEQILRCLVDRNIIGEGFSGVVYQADMDNGQIIAVKKLRPAIMTADDECEHDKRGFLDSFTTEVKTLGSIRHKNIVRFLGCCWNRCTTLLMYDYMPNGSLGSLLHESNGDSLEWGLRYQILLGAAQGLAYLHHDCVPPIVHRDIKPNNILIDRDFEAHIADFGLAKLLDDSDFAGSSKGIAGSYGYIAPEYGHMMKITKKSDVYSFGVVLLEVLTGKQPNNPTIPDGLHVVDWVKQKRGEIEVLDPRLPFKTESEINEMMQVLGIALLCVNSVPGARPAMKEVAAMLKEIKHGREEYAEIEELLKGSSAIEAREKKDSTGIASTSSKAPATQSLNPNGNV 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02480 1111 Gene3D Transferase(Phosphotransferase) domain 1 866 1081 - -
Bva05g02480 1111 SMART LRR_typ_2 509 532 IPR003591 -
Bva05g02480 1111 SMART LRR_typ_2 365 391 IPR003591 -
Bva05g02480 1111 SMART LRR_typ_2 293 317 IPR003591 -
Bva05g02480 1111 SMART LRR_typ_2 148 172 IPR003591 -
Bva05g02480 1111 SMART LRR_typ_2 413 437 IPR003591 -
Bva05g02480 1111 SMART LRR_typ_2 653 678 IPR003591 -
Bva05g02480 1111 MobiDBLite consensus disorder prediction 1079 1111 - -
Bva05g02480 1111 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 15 1085 - -
Bva05g02480 1111 Pfam Leucine Rich Repeat 511 533 IPR001611 GO:0005515
Bva05g02480 1111 MobiDBLite consensus disorder prediction 1092 1111 - -
Bva05g02480 1111 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 15 1085 - -
Bva05g02480 1111 Gene3D Ribonuclease Inhibitor 439 698 IPR032675 -
Bva05g02480 1111 Gene3D Ribonuclease Inhibitor 207 438 IPR032675 -
Bva05g02480 1111 Gene3D Ribonuclease Inhibitor 32 206 IPR032675 -
Bva05g02480 1111 SUPERFAMILY L domain-like 574 671 - -
Bva05g02480 1111 Pfam Protein kinase domain 782 1054 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02480 1111 ProSiteProfiles Leucine-rich repeat profile. 632 654 IPR001611 GO:0005515
Bva05g02480 1111 SUPERFAMILY RNI-like 250 603 - -
Bva05g02480 1111 PRINTS Leucine-rich repeat signature 630 643 - -
Bva05g02480 1111 PRINTS Leucine-rich repeat signature 512 525 - -
Bva05g02480 1111 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672|GO:0006468
Bva05g02480 1111 SMART serkin_6 779 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02480 1111 ProSitePatterns Protein kinases ATP-binding region signature. 785 808 IPR017441 GO:0005524
Bva05g02480 1111 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
Bva05g02480 1111 ProSiteProfiles Protein kinase domain profile. 779 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02480 1111 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Bva05g02480 1111 SUPERFAMILY Protein kinase-like (PK-like) 755 1058 IPR011009 -
Bva05g02480 1111 Gene3D Phosphorylase Kinase; domain 1 764 865 - -
Bva05g02480 1111 SUPERFAMILY L domain-like 62 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02480 Bva-Chr5 19514738 19518765 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02480 29 1077 Receptor kinase-like Gene Family AT5G56040 44.090 0.0 852
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02480 Pkinase 1.7e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02480 - - pdul:117616188 1403.27