Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva05g02480 | ATGCCGACCAAAAGGCaatctttcttctcttgtgCTCCTTCACTAGTcagttgctttcttttcttcactaTTCTTCTATGTAACCCTGCTTTCTCTGCTAACAATGaagcttctcttctcttttcatgGCTGCACATGTCTGCTTCAACACCCAGTTCATTTTTCTCCAACTGGAACATGCTTGACAGCAACCCCTGTAACTGGAGCTCCATTACTTGTTCTCCTCAAGGTTTTGTCACAGAAATTAACATATTCTCTATCCCTCTTGAGTATTCTCTGCCTtccaatctctcttctttcagATTTCTAAGAAAACTTGTCGTTTCTGATGCAAATCTCACTGGACCCATCCCTGATGACATTGGTAATTGCTCTTTTCTCACAGTTATCGACCTTAGCGTAAATAATCTCATTGGCTCTATCCCTGCAAGTATTGGCAATCTCCAAAACCTGCAGCGTTTGATTTTGAACTCCAACCAGCTCAGTGGAGGAATCCCAGTTGAGCTAAGCAATTGCATTGGTCTAAAATCTCTCGTCCTTTATAGTAACAAGCTAGGTAGCGTTATCCCACCAGTTCTAGGAAAATTGTCTAGACTTGAAGTTCTTCGTGTTGGGGCAAACGTGGATATCACTGGGAAAGTCCCAGATGAGCTAGGAAACTGCACCAATTTGACTCAATTGAGGCTTTCTTTAACTAGCATATCAGGTTCTTTGCCAGCATCATTGGGTCAGCTTCAGAAGCTTCGGAATTTGTCTATCTATTCCACTATGATCTCTGGTGAAATTCCATCTGCTATAGGTAACTGGTCTGAAATTCTGCATTTATATCTTCATAAGAACAGTCTATCGGGTTCTATTCCATCTGAGCTTGGAAAGCTCCAGAAGCTGCAAACATTGCTTTTATTGGACAACAGTCTTTCTGGGTCTATTCCTGAGGAGATTGGCAATTGTACAAGCTTGAAATTCGTTGAGTTTTCTCTCAATTCGTTATCTGGCGCTATCCCTTTGTCTATATGTGGTCTTTCAGAACTTGAAGgtttaatgattaatgataACAGCTTTTCTGGTTCTATACCTTCAAGTCTGTCAAATGTCACAAATCTGCAAAGCTTGGCacttaatagaaataaattttcaggTTTGATTCCACCAGAGCTTGGGATGTTTTCAAAGCTTTCTCTGCTGTATTTTTGGCAGAATCAACTTGAAGGAGTAATTCCTTCTAGTTTGGCCAATTGTTCTAACCTGCAATtccttgatttttcatttaatgaaCTTACTGGTGCCATTCCTGATGGTCTCTTTCAGCTTCAAAACCTCAAACTAATGCTCATAAAAAACAATGATATATCAGGTACAATACCACCAGGAATTGGTAATTGCAGCTCTCTTGAAAGGCTTCTGCTAGAAAACAATCACATTTATGGTGAGATTCCTAAAACAATTGGCAACCTCAAGAACTTAAACTATTGTGATGTTTCTTGGAACTACCTTTCTGGACCAGTTCCAGATGAGATGGGTAATTGTACAAAGCTGCAATTGTTAGACCTAAGCAACAACAGGTTAGAAGGTACATTGCCTAGTTCATTGCAGTCATTATCTAAACTACAGAGTTTAAATGCATCTTTCAATGGGTTTTTGGGCCAAATACCAGCATTCCTGTGTCATATTGATTCCCTGGAAAAGCTAATCCTAAGCAGTAATTCCTTCTCTGGACCAATTCCCTCATCTCTCGGCCTATGTTTGCGTCTCAAAATGCTTGATCTTAGCAGCAATCAGCTGAATGGAAGCATCCCTGCGGAGCTTGGCCATATTCAAAGTCTTGGGATTGCTCTTAACCTTAGCTGCAATTCTCTCAGTGGGTCAATCCCAGCCCAAATTTCTGCACTCAAAAAACTCACAACACTGGACATTTCACATAACATGTTGGAGGGAAGTTTGTGTCCACTGGCAGGGCTAGTTAGTCTTGTCTCTCTCAATGTTTCTTGCAACAACTTCAATGGCTCTCTTCCTGACACTGACCTTTTCAGAGAGTTATCAGCTAAAGAATTAAGGGGAAATCAAGGTCTGGATTATTCTCACCGCATCTCGTGTTTCTTAAGTGATTCAGTCCAGGCAGAATCAACAAGAAGTTCAAGGAAGTCTCTAATGCTTAAAGTTGCAATTGGATTGCTGGTAGTCTTGACGGTGGTATTGAAAACTATAGGGATCATTTCTATAATAATGGCACAAAGAACAACTAGAGATGAAGATTCAGAAATGGGAAGCTCTTGGCCATGGCAGTTCATTCCATTTCAGAATCTAAATTTCTCAGTGGAGCAAATACTGAGATGTTTAGTAGACAGAAACATAATTGGAGAAGGATTCTCTGGTGTTGTGTACCAAGCTGACATGGATAATGGTCAAATCATTGCTGTGAAGAAACTAAGGCCAGCAATAATGACTGCAGATGATGAATGTGAGCATGACAAAAGAGGATTTCTTGACTCATTTACAACAGAGGTGAAAACTCTTGGATCAATCCGACACAAGAACATTGTCAGATTCTTAGGTTGTTGTTGGAACAGATGCACAACATTGCTTATGTATGACTATATGCCAAATGGAAGCTTAGGTAGTTTACTCCATGAGAGTAATGGGGATTCCTTGGAATGGGGACTAAGGTACCAAATCTTGTTAGGAGCTGCACAAGGCCTTGCATATCTACACCATGATTGTGTCCCTCCAATAGTCCACAGAGACATTAAACCTAATAACATCCTCATTGATCGCGATTTTGAAGCTCACATTGCTGACTTTGGCTTGGCTAAGTTGCTTGATGATAGTGATTTTGCCGGGTCCTCCAAAGGAATTGCTGGTTCTTATGGATATATAGCTCCTGAGTATGGCCACATGATGAAGATTACAAAGAAGAGTGATGTTTACAGTTTCGGGGTAGTTTTGCTCGAAGTCTTGACGGGCAAGCAACCAAATAATCCAACAATACCAGATGGGCTACATGTGGTAGATTGGGTGAAACAGAAAAGGGGAGAAATTGAAGTACTGGACCCAAGATTACCATTTAAAACTGAATCGGAAATCAACGAAATGATGCAGGTATTAGGCATTGCACTATTATGTGTAAATTCTGTCCCAGGTGCAAGACCAGCAATGAAGGAAGTTGCAGCAATGCTCAAGGAAATCAAGCACGGAAGAGAGGAATATGCAGAAATAGAAGAACTTTTAAAGGGATCTTCAGCAATCGAAGCACGTGAGAAGAAAGACTCTACTGGGATTGCTTCAACATCCTCAAAAGCACCAGCAACACAAAGCTTGAACCCCAATGGCAATGTCTG | 3335 | 0.3934 | MPTKRQSFFSCAPSLVSCFLFFTILLCNPAFSANNEASLLFSWLHMSASTPSSFFSNWNMLDSNPCNWSSITCSPQGFVTEINIFSIPLEYSLPSNLSSFRFLRKLVVSDANLTGPIPDDIGNCSFLTVIDLSVNNLIGSIPASIGNLQNLQRLILNSNQLSGGIPVELSNCIGLKSLVLYSNKLGSVIPPVLGKLSRLEVLRVGANVDITGKVPDELGNCTNLTQLRLSLTSISGSLPASLGQLQKLRNLSIYSTMISGEIPSAIGNWSEILHLYLHKNSLSGSIPSELGKLQKLQTLLLLDNSLSGSIPEEIGNCTSLKFVEFSLNSLSGAIPLSICGLSELEGLMINDNSFSGSIPSSLSNVTNLQSLALNRNKFSGLIPPELGMFSKLSLLYFWQNQLEGVIPSSLANCSNLQFLDFSFNELTGAIPDGLFQLQNLKLMLIKNNDISGTIPPGIGNCSSLERLLLENNHIYGEIPKTIGNLKNLNYCDVSWNYLSGPVPDEMGNCTKLQLLDLSNNRLEGTLPSSLQSLSKLQSLNASFNGFLGQIPAFLCHIDSLEKLILSSNSFSGPIPSSLGLCLRLKMLDLSSNQLNGSIPAELGHIQSLGIALNLSCNSLSGSIPAQISALKKLTTLDISHNMLEGSLCPLAGLVSLVSLNVSCNNFNGSLPDTDLFRELSAKELRGNQGLDYSHRISCFLSDSVQAESTRSSRKSLMLKVAIGLLVVLTVVLKTIGIISIIMAQRTTRDEDSEMGSSWPWQFIPFQNLNFSVEQILRCLVDRNIIGEGFSGVVYQADMDNGQIIAVKKLRPAIMTADDECEHDKRGFLDSFTTEVKTLGSIRHKNIVRFLGCCWNRCTTLLMYDYMPNGSLGSLLHESNGDSLEWGLRYQILLGAAQGLAYLHHDCVPPIVHRDIKPNNILIDRDFEAHIADFGLAKLLDDSDFAGSSKGIAGSYGYIAPEYGHMMKITKKSDVYSFGVVLLEVLTGKQPNNPTIPDGLHVVDWVKQKRGEIEVLDPRLPFKTESEINEMMQVLGIALLCVNSVPGARPAMKEVAAMLKEIKHGREEYAEIEELLKGSSAIEAREKKDSTGIASTSSKAPATQSLNPNGNV | 1111 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva05g02480 | 1111 | Gene3D | Transferase(Phosphotransferase) domain 1 | 866 | 1081 | - | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 509 | 532 | IPR003591 | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 365 | 391 | IPR003591 | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 293 | 317 | IPR003591 | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 148 | 172 | IPR003591 | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 413 | 437 | IPR003591 | - | |
Bva05g02480 | 1111 | SMART | LRR_typ_2 | 653 | 678 | IPR003591 | - | |
Bva05g02480 | 1111 | MobiDBLite | consensus disorder prediction | 1079 | 1111 | - | - | |
Bva05g02480 | 1111 | PANTHER | RECEPTOR-LIKE PROTEIN KINASE 2 | 15 | 1085 | - | - | |
Bva05g02480 | 1111 | Pfam | Leucine Rich Repeat | 511 | 533 | IPR001611 | GO:0005515 | |
Bva05g02480 | 1111 | MobiDBLite | consensus disorder prediction | 1092 | 1111 | - | - | |
Bva05g02480 | 1111 | PANTHER | LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED | 15 | 1085 | - | - | |
Bva05g02480 | 1111 | Gene3D | Ribonuclease Inhibitor | 439 | 698 | IPR032675 | - | |
Bva05g02480 | 1111 | Gene3D | Ribonuclease Inhibitor | 207 | 438 | IPR032675 | - | |
Bva05g02480 | 1111 | Gene3D | Ribonuclease Inhibitor | 32 | 206 | IPR032675 | - | |
Bva05g02480 | 1111 | SUPERFAMILY | L domain-like | 574 | 671 | - | - | |
Bva05g02480 | 1111 | Pfam | Protein kinase domain | 782 | 1054 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva05g02480 | 1111 | ProSiteProfiles | Leucine-rich repeat profile. | 632 | 654 | IPR001611 | GO:0005515 | |
Bva05g02480 | 1111 | SUPERFAMILY | RNI-like | 250 | 603 | - | - | |
Bva05g02480 | 1111 | PRINTS | Leucine-rich repeat signature | 630 | 643 | - | - | |
Bva05g02480 | 1111 | PRINTS | Leucine-rich repeat signature | 512 | 525 | - | - | |
Bva05g02480 | 1111 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 910 | 922 | IPR008271 | GO:0004672|GO:0006468 | |
Bva05g02480 | 1111 | SMART | serkin_6 | 779 | 1062 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva05g02480 | 1111 | ProSitePatterns | Protein kinases ATP-binding region signature. | 785 | 808 | IPR017441 | GO:0005524 | |
Bva05g02480 | 1111 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Bva05g02480 | 1111 | ProSiteProfiles | Protein kinase domain profile. | 779 | 1069 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bva05g02480 | 1111 | Pfam | Leucine rich repeat N-terminal domain | 34 | 74 | IPR013210 | - | |
Bva05g02480 | 1111 | SUPERFAMILY | Protein kinase-like (PK-like) | 755 | 1058 | IPR011009 | - | |
Bva05g02480 | 1111 | Gene3D | Phosphorylase Kinase; domain 1 | 764 | 865 | - | - | |
Bva05g02480 | 1111 | SUPERFAMILY | L domain-like | 62 | 297 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva05g02480 | Bva-Chr5 | 19514738 | 19518765 | Dispersed/Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva05g02480 | 29 | 1077 | Receptor kinase-like Gene Family | AT5G56040 | 44.090 | 0.0 | 852 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Bva05g02480 | Pkinase | 1.7e-41 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva05g02480 | - | - | pdul:117616188 | 1403.27 |