Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02479 atgataAGAGGAACTAGAGGTTATATGGCACCAGAGTGGATTTTCAAATTGCCAATCACATCGAAGGTGGATGTTTACAGCTATGGTATTGTCCTCCTTGAGATGATAACTGGAAAGAGCTCAACAATGGGGGTCCAAAATGTTAGTGGAGTTGAGGAACCTCACGGGAGGCTAGTCACATGggtgagagagaaaagaaaccaaagattTGAAATGGCCTCTTGGGTGGAGGAAATCATTGCCCCCGTGATAGAAGCAAATTATGACATAAACATCATGGAAACTTTGGCTAGTGCGGCTTTGGATTGTGTAGAGGAAGACAGAGACTCGAGACCCACCATGCGTCAAGTGGTTGAGTTGCTCCAAAGACTTTATAATGATTCTTA 386 0.4067 MIRGTRGYMAPEWIFKLPITSKVDVYSYGIVLLEMITGKSSTMGVQNVSGVEEPHGRLVTWVREKRNQRFEMASWVEEIIAPVIEANYDINIMETLASAALDCVEEDRDSRPTMRQVVELLQRLYNDS 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02479 128 Gene3D Transferase(Phosphotransferase) domain 1 1 128 - -
Bva05g02479 128 PANTHER SERINE/THREONINE KINASE, PLANT-TYPE PROTEIN 2 125 - -
Bva05g02479 128 SUPERFAMILY Protein kinase-like (PK-like) 2 121 IPR011009 -
Bva05g02479 128 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02479 128 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 2 125 - -
Bva05g02479 128 Pfam Protein kinase domain 3 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02479 Bva-Chr5 19507180 19507566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02479 2 128 Receptor kinase-like Gene Family AT2G28250 34.109 6.66e-17 73.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bva05g02479 Pkinase 2.6e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02479 - - ccaj:109812862 171.785