Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02474 ATGCATCATGATTGTACCCCGGCAATGATCCATCGTGATATAACTAGTAGCAACATTTTGTTGAACTCCAAGTTGGAGGCTTTGTTGTCTGACTTTGGAACAGCTAGATTCCTTGATCCAGATTCATCCAATCAAACTCAACTAGTTGGTACTTATGGATATATTGCTCCAGaatttgcatatatatttaaagtgaCAGAAAAGTGCGATGTTTATAGCTTTGAAGTTGTGGCATTAGGAGTAATGATCGGAAAACATCCTGGAGATCTTATTTCCTCATTGTCAAAGCCTTCTACTCAAATGCTAAGGGATGTCTTGGACTCACGTCTACCACTTCCTTTCTTTCGAAAAGATGAACAGGATGTGGTTATTGTGGTGACGCTGGCAATAGCATGTTTGCGTTCGTCGCCAAAATATAGGCCATCTATGCAACAAGTAGCTCAGGAACTACTGGTTTCCAAGCCACTAGTTTTTTTGTCCTTGAATGATGTCTCAATTCAACAGTTGAAGAATCGAGATTATATCTA 527 0.3852 MHHDCTPAMIHRDITSSNILLNSKLEALLSDFGTARFLDPDSSNQTQLVGTYGYIAPEFAYIFKVTEKCDVYSFEVVALGVMIGKHPGDLISSLSKPSTQMLRDVLDSRLPLPFFRKDEQDVVIVVTLAIACLRSSPKYRPSMQQVAQELLVSKPLVFLSLNDVSIQQLKNRDYI 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02474 175 Gene3D Transferase(Phosphotransferase) domain 1 1 156 - -
Bva05g02474 175 ProSiteProfiles Protein kinase domain profile. 1 157 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02474 175 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 1 164 - -
Bva05g02474 175 SUPERFAMILY Protein kinase-like (PK-like) 1 151 IPR011009 -
Bva05g02474 175 Pfam Protein kinase domain 9 148 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02474 175 ProSitePatterns Tyrosine protein kinases specific active-site signature. 9 21 IPR008266 GO:0004672|GO:0006468
Bva05g02474 175 PANTHER MDIS1-INTERACTING RECEPTOR LIKE KINASE 2-LIKE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02474 Bva-Chr5 19455010 19455938 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02474 1 150 Receptor kinase-like Gene Family AT2G35620 41.358 4.45e-31 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02474 Pkinase 5.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02474 - - aprc:113851126 230.72