Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02473 ATGAGATTAATGGGAAGTATCCCTGCTGAAATAGGTGCTATTAACAAGCTCACCTATCTCAACCTCTCACATAACAATCTCACAGGTGAGTTACCCTCTACAATTGGAAATCTCACTCAACTTGTGATGCTTGATGTTTCTTCCAATTCAATTGATGGTGAGATTCCTCAtgagtttatcaatttgaagaAACTTGTCTTATTGAACTTGACTCAAAATAGCTTCAATGGATCCATACCATCTGAGATTGGATATATCTCTAGTCTTAAATTTCTTGACATTTCCAACAACAACCTCCATGGACCCATCCCATCTGGTCTTATGAATCATTGCCCTTACCTGAAACTAAACAACAACTTCTTGAATGGAAGTGTCCCCACTCGAATAACCGATCTTTCATCCCTGGATCTTAGTTATAACAACTTCACTAGCAATTATCCTGAGAAAACAGCAAGTTATATGCTTAGAATTTTGAGTGCTTTCATGCTTGGTGTTTTTGTGGCCTGTGGTGTGTTCTATATAGTTATGTTACTCTATGCGGCCGAGGACCTCAAAGACGCggaaagaagaagcaaatctgaggaaagaagaagaaacaatgcAGACTTCTCAATCTGGAACTATGATGGTAAAGTTACATATGAAGATATCATTGAAGCAACAAATGACTTTGATATCAAGTATTGTATAGGCACGGGAGCTTATGGTAGCGTTTATAAAACACAACTACCAAATGGAAAGATTGTTGCGGTAAAGAAACTCTATAGAATGGAATCTGAAAATCCATCTTTTGATAAGAGTTTCGGCAATGAGGTGAAGATGTTAACAGAAATCTGCCATTGGAACATTTTGAGGCTTTATGGGTTTTGCTTACACAAGAGAAATATGTTTTTGGTTTATGAATATATGGAAGGAGGAAGCTTGTCTTTTGTCTTGGCAAATATGATGGAGAAGCTTTCAAATTG 965 0.3503 MRLMGSIPAEIGAINKLTYLNLSHNNLTGELPSTIGNLTQLVMLDVSSNSIDGEIPHEFINLKKLVLLNLTQNSFNGSIPSEIGYISSLKFLDISNNNLHGPIPSGLMNHCPYLKLNNNFLNGSVPTRITDLSSLDLSYNNFTSNYPEKTASYMLRILSAFMLGVFVACGVFYIVMLLYAAEDLKDAERRSKSEERRRNNADFSIWNYDGKVTYEDIIEATNDFDIKYCIGTGAYGSVYKTQLPNGKIVAVKKLYRMESENPSFDKSFGNEVKMLTEICHWNILRLYGFCLHKRNMFLVYEYMEGGSLSFVLANMMEKLSN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02473 321 Pfam Leucine Rich Repeat 16 38 IPR001611 GO:0005515
Bva05g02473 321 Pfam Leucine Rich Repeat 88 105 IPR001611 GO:0005515
Bva05g02473 321 Gene3D Phosphorylase Kinase; domain 1 184 302 - -
Bva05g02473 321 SUPERFAMILY Protein kinase-like (PK-like) 199 316 IPR011009 -
Bva05g02473 321 PRINTS Leucine-rich repeat signature 17 30 - -
Bva05g02473 321 PRINTS Leucine-rich repeat signature 86 99 - -
Bva05g02473 321 Pfam Protein kinase domain 228 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02473 321 ProSitePatterns Protein kinases ATP-binding region signature. 230 253 IPR017441 GO:0005524
Bva05g02473 321 SUPERFAMILY L domain-like 3 148 - -
Bva05g02473 321 ProSiteProfiles Protein kinase domain profile. 224 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02473 321 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 317 - -
Bva05g02473 321 ProSiteProfiles Leucine-rich repeat profile. 16 38 IPR001611 GO:0005515
Bva05g02473 321 Gene3D Ribonuclease Inhibitor 1 161 IPR032675 -
Bva05g02473 321 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 3 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02473 Bva-Chr5 19453991 19454956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02473 2 314 Receptor kinase-like Gene Family AT4G08850 39.375 7.32e-59 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02473 Pkinase 1.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02473 - - vra:106773464 301.212