Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02466 ATGGAATCTGAAAATCCATCTTTTGATAAGAGTTTCCGCAATGAGGTGAAGATGTTAACAGAAATCCGCCATTGGAACATTTTGAGGCTTTATGGGTTTCGCTTGCACAAGAGAAATATGTTTTTGGTTTATGAATATATGGAAGGAGGAAGCTTGTCTTTTGTCTTGGCAAATGATGGAGAAGCTTTCAAATTGAATTGGAGCAAGAGGGTTAATATCATAAAGGGGATAGCCAGTGCTTTGGCTTATATGCATCATGATTGTACCCCAGCAATGATCCATCGTGATATAACCAGTAGCAACATTTTGTTGAACTCCAAGTTGGAGGCTTTTTTGTCTGATTTTGGAACAGCTAGATTCCTTCATCCAGATTCATCCAATCAAACTCTGCTAGTTGCCACTTATGGATATATTGCCCCAGAACTTGCTTATACATTTAGAGTGATAGAAAAATGCGACGTCTATAGTTTTGGAGTGGTTGCATTAGAAATTATGATGGGGAAACATCCAGAagattttatttcaacattaTCAAAGCCTTCTACTCAAATGCTAAGGGATGTTTTGGACTCACGTCTACCACTTCCTTTCTTTCGGAGAGATGCGCAGGATGTGGTTCTTGTGGTAACCCTAGCATTAGCATGTTTGCGTTCGTCGTGCAAAGCTAGGCCATCTATGCAACAAATAGCTCAAGAACTGCTGGTTTCCAAGCCACTAGTTTATTTACCCTTTAATGATGTCTCAATTTA 749 0.3872 MESENPSFDKSFRNEVKMLTEIRHWNILRLYGFRLHKRNMFLVYEYMEGGSLSFVLANDGEAFKLNWSKRVNIIKGIASALAYMHHDCTPAMIHRDITSSNILLNSKLEAFLSDFGTARFLHPDSSNQTLLVATYGYIAPELAYTFRVIEKCDVYSFGVVALEIMMGKHPEDFISTLSKPSTQMLRDVLDSRLPLPFFRRDAQDVVLVVTLALACLRSSCKARPSMQQIAQELLVSKPLVYLPFNDVSI 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02466 249 Pfam Protein kinase domain 4 232 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02466 249 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 248 - -
Bva05g02466 249 ProSitePatterns Tyrosine protein kinases specific active-site signature. 92 104 IPR008266 GO:0004672|GO:0006468
Bva05g02466 249 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02466 249 PIRSF ILK 2 236 - -
Bva05g02466 249 Gene3D Phosphorylase Kinase; domain 1 1 47 - -
Bva05g02466 249 Gene3D Transferase(Phosphotransferase) domain 1 48 238 - -
Bva05g02466 249 SUPERFAMILY Protein kinase-like (PK-like) 6 234 IPR011009 -
Bva05g02466 249 PANTHER FLAGELLIN-SENSING-LIKE PROTEIN 2 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02466 Bva-Chr5 19360795 19361814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02466 5 140 Receptor kinase-like Gene Family AT4G08850 61.029 3.26e-54 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02466 Pkinase 1.7e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02466 - - gmx:100789677 354.369