Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02454 ATGCTGCTTTCAGGGAACCATCAGCATGAGAGCATGATACTTTTAGCTATAAgGTTCCATATCCAGTCAGTATCTAAACAATTGTGCAGAGAGGAGATAGAGAGACAAATGTGTCCAGCAAGCTCATCAAGATGGTGTCCAACACCAGAGCAGCTTATGATTCTGGAGAAAATGTACAGAAATGGAGTTAGAACACCAAATGCTTCACAAATTCAACACATCACAGcctatctttctttctatggAAAGATTGAAGGTAAGAATGTTTTCTACTGGTTTCAGTATCATAAAACAAGAGATTG 302 0.3609 MLLSGNHQHESMILLAIRFHIQSVSKQLCREEIERQMCPASSSRWCPTPEQLMILEKMYRNGVRTPNASQIQHITAYLSFYGKIEGKNVFYWFQYHKTRD 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02454 100 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 37 100 IPR044555 GO:0003700|GO:0099402
Bva05g02454 100 Pfam Homeodomain 42 99 IPR001356 GO:0003677
Bva05g02454 100 PANTHER WUSCHEL-RELATED HOMEOBOX 3 37 100 - -
Bva05g02454 100 SUPERFAMILY Homeodomain-like 43 99 IPR009057 -
Bva05g02454 100 Gene3D - 38 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02454 Bva-Chr5 19177076 19178389 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02454 37 100 Wox Gene Family AT2G28610 78.125 5.04e-35 118
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva05g02454 Homeodomain 1.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02454 - - twl:120010778 123.25