Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02445 atgtgTCCAGCAAGCTCATCAAGATGGTGTCCAACACCAGAGCAGCTTATGACTCTGAGGAAAATGTACAGAAATGGAGTTAGAACTCCAAATGCTTCACAAATTCAACACATCACAGCCCATCTTTCTTTCTATGGAAAGATTGAAGGTAAGAATGTTTTCTACTGGTTTCAGAATCATAAAACAAGAGATAGACAGAAGCTAAGAGGGAAATTGAACAAGCAGCTGCACCTGCAGCTCCAACAGCAACAGCAACTCAATTATCACCATCACCATCACCACCTGAGCCAGACAAGCCATTTTCTCTATGATCTTGGCTCTGGTTCTGGTTCAACTTCAATTTCTACCTTCCAACTTCCATTCTATAACTCAGTTGGCTTGTTTCCAAAGAGAGGAGCTAGAGAAGCATCAAAACAAGCCAAAAATTATCCATGGAAAATGGGTAAACCAGAGGCATTGAAGGAAAACACAATGCTGACAACATTCTACAATGAAGATTGGACAATGATGGTGGATGTGGGTCCCCCTCCATGTTGTTGCCCTAAACCTCTTAAGACTCTGGAACTGTTTCCAATCACTGATAGACTCAAAGCAGCAGAGTA 602 0.4153 MCPASSSRWCPTPEQLMTLRKMYRNGVRTPNASQIQHITAHLSFYGKIEGKNVFYWFQNHKTRDRQKLRGKLNKQLHLQLQQQQQLNYHHHHHHLSQTSHFLYDLGSGSGSTSISTFQLPFYNSVGLFPKRGAREASKQAKNYPWKMGKPEALKENTMLTTFYNEDWTMMVDVGPPPCCCPKPLKTLELFPITDRLKAAE 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02445 200 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 193 IPR044555 GO:0003700|GO:0099402
Bva05g02445 200 PANTHER WUSCHEL-RELATED HOMEOBOX 3 1 193 - -
Bva05g02445 200 SUPERFAMILY Homeodomain-like 7 66 IPR009057 -
Bva05g02445 200 Pfam Homeodomain 6 66 IPR001356 GO:0003677
Bva05g02445 200 ProSiteProfiles 'Homeobox' domain profile. 12 67 IPR001356 GO:0003677
Bva05g02445 200 CDD homeodomain 8 67 IPR001356 GO:0003677
Bva05g02445 200 SMART HOX_1 4 71 IPR001356 GO:0003677
Bva05g02445 200 Gene3D - 4 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02445 Bva-Chr5 19068365 19070067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02445 1 193 Wox Gene Family AT2G28610 42.083 5.79e-42 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Bva05g02445 Homeodomain 2.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02445 - - dzi:111284239 189.504