Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02444 ATGGGAAAACAAACTAAGGAGAAACATTCTGGCATGTCTCCAGAGAGTAGTAGTCAACCGACAGGAGTATGGGGAATCCAGCATATCATGAAGTATTATCAATGGCGTCAAGTCAAGAAAAAGTTTATGCACAGGAAGCAAGGTGGTGAAAGAAATGCTGCAAGATCtgaagctccaaagttcattGATTCCACTGGGGTTGTTAATTTGCTGGAACAAGACAAGTCTGGGACTACATCCTCTAATGTTGAAGAACCACAAGTACAGTCCACTCTCCGAACCAAACATTCTGTGAAATCCAGGTTAAAAGCACTTATTACTGAAGAGATATCCAGAAAGAAAGGTCGACATAATAGAAGTTCAACCTACCCTGCAAAGTCTCCCCAACCTCAATCTGAACCGGTTCATAGAGTAGATACTTCAGAGATTGATCCCCTTACTGAAATGTTACAAGCACTTGAAGGTTCAAAAATGCCTCCACAAATGAGTAGGAACCATCATGCTACTGACACATTGGATGTATCGCCACAAGCTTCCTCTGAAGAACCAACTTCTAATAATGAAACGCGTGTTGATAGTGACACTGATTCTGATAGTGATTCTTCGGAGTCTAGCCAGATTCATAAGCATGGAAAGGAACCTACAGAAGATCAAACCCTTCTGCAGCAAAATTCAAGCTTTTCTAGTCCAAGCGACCCAGAGGAGAAGTTAATTCGTGCAAAGATACTAACAGCAGATGCTTCACCCCAACTTTTCAAGGATTTTCTGGATGCTCTTGAAATAATCAACTCAAACAAGGACTTTCTGGTAAAGGTTCTTCATCATCCAAGCTCTCCTTTAGTGCATCACTATCATTCTCAGCAGACATTTGGTGGGAAAATGGCGTTAAACAAGTCTTTGTCATTTCCTGGTCCCGGCTCATCATCAGGAAGTAAATATTCTGTGCTTGGTCAACCCAACAAAATGGTAGATGATATGAATAATGCAACACCAGAGAGACGTTTATCAACTGAAAGTGAAATGCAAACTGAATGTCTGTCTAATTCTTCAgaagattttcaaaaacaGTCCAtgtcttcaaattcttcatttaaattagataGAATTCCAAGTCTTAAACAAGATTTGGCTGAGAGAGGTTCTAATTTTTCATCAGTTTCAGTAGAGGGTCAGAACCAAATGGTTATGAAGCGGTTCAAGGATCTTAAACAGAAGATCAAACATGTTATAGAGGATAGCAAAAATGAAAGGCATCGCATCACCAGGGATGGTATGATTCACAAAATTCCTCATGGAAATAACGTTTCTATGGAATTGAAGAAGATTCTTGAGAAGTGCAAAGACTCTGCATTTACTGAAGGAAAACACACTGCTAGAAGTGGTTATGACAATCGTCCTCCTTTTTATTCATTCAGAAAGCGTCAACTCTCCCCCGTGGGGACTTCATCTCTGAAAGAATCAACGCACAGATATTCTCAGCTGTCTGAGAATAGTTTTAACAAAGATATCAAGTACCCCAAATCCGAGAGGTTGAGATTGAGAGCAGAAGATACAAGTTCAGCATTAAAGACtgcaaaattcttcaaaagatTTCTTTCAATGCCTAACCTCAAATCTTACTTCCAGCAGAGTGATGAACCTCCCATTGCTTTATCTCCTATGATACCGATTAGGAAATTTGGAGAGAGTACACCAAGCATAagtagaaatgaagagaagaagagttTTTACCATAGTGATTCCAACAAGCTTCTAGATACTACAATTCAAGATAGCATTTCCAAAGGTGCtcgaaataaatttattattggaagCATTGCAGGTTCAGGACTAGATGTGAATAATGAGGCATATGCTAAGGAAAGCAtaaaaatggatgaatttcCATTCTTAACAGACAGTGATAGTGCTGCTTGCGCTGAGCAAGATGCTGgagcaacaagaaaatctgCTATTATGACAGAAGAAGCAAAATCAGTCTCCTCTGAATACAGCAGCACTTCATCCCAATCTGAAGATTCCAAGTTAAATCGAGGCCTTGCTTATGAATTGATAGATAAAGATTTGTATGACCAAGAGGAGACTAAAGTGGATTATCTTGGCAAGCACTTTGACGATCTAACATCTCTTGTTGAAGTGAATGCTAGAAATAAAGCTGAATTCAATTATGTGAAAGAAGTGTTAGAGATTTCTGGCTTCACTGGCCATGAATCTCTTGCAACATGGTATTCTGTTGACCAACCAGTTGACCCTTCAGTCTATGAAGAACTAGAGGGTTGCTGGCTTTCTGATCCTAATTGCTCTGGTAATGAAGGTGGTCAGTGTAATcatcttgttttgtttgatcTAATCAATGAGGTTTTAGTGGAAATTTTTGGAAGATCATACAGCTATTATCCCAGGCCATTGTCTTCTGTCTGTCATCTTCGTCTAATGCCGGCAGGAGACCGTGTTCTTCGCCAAGTATGGATACTTATAAGCTTCTATCTCAGCTCAAAAGCTCCAAATTCCCTGTCATTGGACTACTATAGCAGCAAAGACCTATCCAAACATGATGGCTGGATGAATCTCCAATTTGATTCTGAATGCATAGTTCTTGAGCTAGATGACTTAATTTTTGATGATCTTATGGATGAGTTCATTTTTGATGATCTTTTGGAGGAACTCTTCTGCACTTG 2678 0.373 MGKQTKEKHSGMSPESSSQPTGVWGIQHIMKYYQWRQVKKKFMHRKQGGERNAARSEAPKFIDSTGVVNLLEQDKSGTTSSNVEEPQVQSTLRTKHSVKSRLKALITEEISRKKGRHNRSSTYPAKSPQPQSEPVHRVDTSEIDPLTEMLQALEGSKMPPQMSRNHHATDTLDVSPQASSEEPTSNNETRVDSDTDSDSDSSESSQIHKHGKEPTEDQTLLQQNSSFSSPSDPEEKLIRAKILTADASPQLFKDFLDALEIINSNKDFLVKVLHHPSSPLVHHYHSQQTFGGKMALNKSLSFPGPGSSSGSKYSVLGQPNKMVDDMNNATPERRLSTESEMQTECLSNSSEDFQKQSMSSNSSFKLDRIPSLKQDLAERGSNFSSVSVEGQNQMVMKRFKDLKQKIKHVIEDSKNERHRITRDGMIHKIPHGNNVSMELKKILEKCKDSAFTEGKHTARSGYDNRPPFYSFRKRQLSPVGTSSLKESTHRYSQLSENSFNKDIKYPKSERLRLRAEDTSSALKTAKFFKRFLSMPNLKSYFQQSDEPPIALSPMIPIRKFGESTPSISRNEEKKSFYHSDSNKLLDTTIQDSISKGARNKFIIGSIAGSGLDVNNEAYAKESIKMDEFPFLTDSDSAACAEQDAGATRKSAIMTEEAKSVSSEYSSTSSQSEDSKLNRGLAYELIDKDLYDQEETKVDYLGKHFDDLTSLVEVNARNKAEFNYVKEVLEISGFTGHESLATWYSVDQPVDPSVYEELEGCWLSDPNCSGNEGGQCNHLVLFDLINEVLVEIFGRSYSYYPRPLSSVCHLRLMPAGDRVLRQVWILISFYLSSKAPNSLSLDYYSSKDLSKHDGWMNLQFDSECIVLELDDLIFDDLMDEFIFDDLLEELFCT 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02444 892 PANTHER TRM32-LIKE PROTEIN (DUF3741) 1 882 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 157 233 - -
Bva05g02444 892 Pfam Domain of unknown function (DUF4378) 720 879 IPR025486 -
Bva05g02444 892 MobiDBLite consensus disorder prediction 187 216 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 101 116 - -
Bva05g02444 892 Pfam Protein of unknown function (DUF3741) 235 278 IPR022212 -
Bva05g02444 892 MobiDBLite consensus disorder prediction 1 23 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 121 136 - -
Bva05g02444 892 PANTHER PROTEIN TRM32 1 882 IPR044257 -
Bva05g02444 892 MobiDBLite consensus disorder prediction 217 232 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 43 139 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 69 95 - -
Bva05g02444 892 MobiDBLite consensus disorder prediction 162 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02444 Bva-Chr5 19062682 19067278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02444 1 873 TRM (TON1 Recruiting Motif) Superfamily AT5G02390 30.867 3.38e-98 324
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02444 - - gmx:100807303 673.315