Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02438 ATGATAGCTTTGATAGGTCTTGTTATTAAGATGTCAAGCAAATTCAACGCGCGGAGAGCTTTAGCAGACGGATGTTGTGGAGTTCTACTGTTGTTCACTCTACTTCTTTATACCACTGAAGGGTTGAACTTAGAGGGGCAGTACCTTTTGGAGCTGAAGAATAATCTCCATGATGAATCTAATCATTTGGGAAATTGGAAATCTACTGACGAAACCCCATGTGGTTGGATAGGCGTAAGTTGCTCTTCTGACTCCAATCCGGTAGTCCAGTCAGTTAACTTGAGGTGGATGAATCTTTCTGGAACTCTAAATGCAAGTATTGGGGGACTGACCCACCTAACTTATCTCAATCTTGCTTACAACCGTCTGGTGGGAAATATACCCAGGGAGATTGGAAATTGCTCAAGTTTGGAATATCTCTATTTGCACAATAATAGTTTCGATGGCCAAGTTCCTGCTGAATTGGGTAAGCTGTCCCTTTTGAAAAGGTTGAATATATGCAATAACATATTATCTGGTACTCTTCCAGATGAGTTGGGAAACTTGTCTTCATTGGTTGAGTTTGTGGCCTACACTAACTTTCTCACTGGTCCACTGCCTCATTCTATTGGAAATCTTAAGAATCTACAAACTTTCAGAGCTGGGGCAAACCGAATCTCTGGTAGCTTGCCACAAGAAATTGGTGGATGTCAGAGATTGGAATATCTTGGTCTAGCCCAAAATCAGATAGGCGGGGAACTTCCAAAAGAGATTGGGATGCTTGGGAATTTAAGAGAATTGATTTTATGGCAAAACCAGTTGTCAGGATCTATTCCTAAAGAGTTTGGGAACTGTAGCATCCTTGAGATCCTTGctttatattcaaataacCTTGTTGGATCTATACCTGTGGAAATTGGGAACCTTAAATCATTGAAGAAATTGTATCTTTACAGCAATAAGTTGAATGGAACCATTCCAAGGGCAATTGGGAATCTTTCTTCGGCAATAGAAATTGATTTCTCAGAAAACTCTTTAGTGGGCAATATCCCTACTGAGTTCAGCAAAATAACTGGCCTACAGTTGCTGTTTCTCTTTGAGAACCAGCTCACTGGTGTTATACCCAATGAGTTTAGTAACTTGAGGAACTTGAGAAAGCTGGACCtctctattaattttctcacagGTCCAATTCCATTTGGGTTCCAGTACTTGACTGAAATGAATCAGTTGCAACTTTTTAATAACTCTCTAAGTGGTACCATTCCTCAGCTCCTTGGACTGTATAGTACTCTTTGGCTGGTTGATTTTTCTGACAACCAGTTGACAGGAAAAATACCTCCGCATCTGTGTCGACATTCTAACTTGTCTTTCTTGGATCTGGCATCAAATCAGCTGCATGGAAATATTACTACTGGGATCTTGAATTGTAGATCATTGAGGCAGCTGATGTTGGGTGGAAATAAGTTTACTGGCAGTTTTCCATCAGAATTGTGTCAACTGGTGAACCTTACTGCCATTGAGTTATCTCAGAACAGGTTCAGTGGTCCTATTTCTCCTCAGATTGCAAATTGTAGGAAGTTGCAAAGACTTCATGTTTCACAGAATTACTTCACATTGGAATTACCTAAAGAAATAGGAAATCTTTCTCAGTTGGTGACTTTAAATGTTTCCTTGAATTCTTTCATTGGACAATTCCCACGTGAAATTGTTAGATGCAAAATGCTTCAGCGACTTGATCTCAGTCAGAATAGCTTGACTGGTTCATTGCCAGAAGAGCTTGGAACACTTTCACAGCTGGAGCTTCTCAGTCTCTCAGACAATAAAGTCACCGGGAATATTCCTGCATCATTAGGTAATCTTTCTCGCTTGACTGGCTTGCAGATGGGTGGCAATTTACTTTCTGGAGAAATACCTCCTGAGTTGGGTTCTCTTTCAAGCTTGCAGATTGCTATGAATCTCAGTTACAATAATCTTACAGGAAGCATACCATCTGAGCTTGGCAAACTCAGTTTGCTTGAATTCCTTTTTCTCAATAACAATCATTTAGATGGTGAAATTCCCAGTACATTGGAGAATCTCTCAAGTTTACTGGGGTGTAATTTCTCATACAACAACCTCTCTGGACCTCTACCTTCTGTTCCCTTGTTCCAAAATATGGCAATAAGCAGCTTTGTTGGTAACAAAGGCCTCTGCGGTGCTCCTCTGGATGATTGCATCACTGATCCATCTTCTCGTTCACTTCCAGCTGTGAGAAGTGTTGGTACTCCTCGCGGTAAAATTGTCACCATAGTTGCAGGTGCTGTTGGTGGTGTTTCCCTTGTTTTAATCTTCgttatgttatatattatgAGAAGTTCTCCCAAGACGGTTGCTCTTGCTTCATCAAGGGGTTCTGAGATTCCATCCCCAGATTCAGATTTATATTTTCCACCAAAAGAAGGTTTTACTTTCGAAGATTTAGTTGAAGCTACGAATAATTTTCATGAGAGGTATGTTATTGGAAGTGGAGCTTGTGGAACAGTTTACAAAGCAGTGATGCAATCTGGGAAAACCATTGCTGTTAAGAAGTTAGCATCTAACAGGGAGGGGAACAACATCGAGAATAGTTTTCGGGCTGAGATACTAACTCTTGGAAAGATAAGGCATCGAAATATAGTGAAGCTGTATGGCTTTTGCTATCACCATGGTTCCAATCTCCTGCTGTATGAGCACATGCCAAGAGGTAGCTTAGGTGAAATACTTCATGGTTCTGTTTTTCATTTGGAGTGGCCTACTCGGTTCAAGATTGCCTTTGGATCTGCTGAAGGTCTTGCCTACTTGCATCATGACTGCAAACCAAGGATTATTCACCGCgatataaaatctaataacATTCTTCTTGATGATAAATTTGGAGCCCATGTTGGTGATTTTGGCTTGGCAAAAGTGATTGACATGCCTCAATCAAAGTCAATGTCAGCAGTTGCTGGATCTTATGGGTATATTGCTCCTGAATATGCATATACTATGAAGGTCACTGAAAAATGTGATATTTACAGTTACGGCGTCGTTCTGTTGGAGCTGCTAACTGGAAGAACTCCTGTTCAGCCCATAGAAGAAGGAGGTGATCTTGTGACATGGACAAGACACCATATCAGGAATCATGACAATAAATTAACTTCAGATATACTCGACAATCGTATGAATCTTCAAGACCAAGTAACTCTGAATCACATGCTTACTGTCATGAAAATTGCTATAATCTGCACAAATATGAACCCTACCAAAAGGCCATCAATGAGGGAAGTAGCGTTGATGCTTCTTGAATCGAATGATCGCGAAGGGAACTTAACCCTGTCTTCTAGTTATGATGATCTTCATTCGAGAGATGGCGCGTG 3359 0.401 MIALIGLVIKMSSKFNARRALADGCCGVLLLFTLLLYTTEGLNLEGQYLLELKNNLHDESNHLGNWKSTDETPCGWIGVSCSSDSNPVVQSVNLRWMNLSGTLNASIGGLTHLTYLNLAYNRLVGNIPREIGNCSSLEYLYLHNNSFDGQVPAELGKLSLLKRLNICNNILSGTLPDELGNLSSLVEFVAYTNFLTGPLPHSIGNLKNLQTFRAGANRISGSLPQEIGGCQRLEYLGLAQNQIGGELPKEIGMLGNLRELILWQNQLSGSIPKEFGNCSILEILALYSNNLVGSIPVEIGNLKSLKKLYLYSNKLNGTIPRAIGNLSSAIEIDFSENSLVGNIPTEFSKITGLQLLFLFENQLTGVIPNEFSNLRNLRKLDLSINFLTGPIPFGFQYLTEMNQLQLFNNSLSGTIPQLLGLYSTLWLVDFSDNQLTGKIPPHLCRHSNLSFLDLASNQLHGNITTGILNCRSLRQLMLGGNKFTGSFPSELCQLVNLTAIELSQNRFSGPISPQIANCRKLQRLHVSQNYFTLELPKEIGNLSQLVTLNVSLNSFIGQFPREIVRCKMLQRLDLSQNSLTGSLPEELGTLSQLELLSLSDNKVTGNIPASLGNLSRLTGLQMGGNLLSGEIPPELGSLSSLQIAMNLSYNNLTGSIPSELGKLSLLEFLFLNNNHLDGEIPSTLENLSSLLGCNFSYNNLSGPLPSVPLFQNMAISSFVGNKGLCGAPLDDCITDPSSRSLPAVRSVGTPRGKIVTIVAGAVGGVSLVLIFVMLYIMRSSPKTVALASSRGSEIPSPDSDLYFPPKEGFTFEDLVEATNNFHERYVIGSGACGTVYKAVMQSGKTIAVKKLASNREGNNIENSFRAEILTLGKIRHRNIVKLYGFCYHHGSNLLLYEHMPRGSLGEILHGSVFHLEWPTRFKIAFGSAEGLAYLHHDCKPRIIHRDIKSNNILLDDKFGAHVGDFGLAKVIDMPQSKSMSAVAGSYGYIAPEYAYTMKVTEKCDIYSYGVVLLELLTGRTPVQPIEEGGDLVTWTRHHIRNHDNKLTSDILDNRMNLQDQVTLNHMLTVMKIAIICTNMNPTKRPSMREVALMLLESNDREGNLTLSSSYDDLHSRDGA 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02438 1119 Pfam Protein kinase domain 822 1090 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02438 1119 SUPERFAMILY L domain-like 468 729 - -
Bva05g02438 1119 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 13 1105 - -
Bva05g02438 1119 ProSiteProfiles Protein kinase domain profile. 821 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02438 1119 SUPERFAMILY L domain-like 58 411 - -
Bva05g02438 1119 SMART serkin_6 821 1094 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02438 1119 Gene3D Ribonuclease Inhibitor 195 293 IPR032675 -
Bva05g02438 1119 Gene3D Ribonuclease Inhibitor 294 402 IPR032675 -
Bva05g02438 1119 ProSitePatterns Serine/Threonine protein kinases active-site signature. 942 954 IPR008271 GO:0004672|GO:0006468
Bva05g02438 1119 Gene3D Phosphorylase Kinase; domain 1 790 898 - -
Bva05g02438 1119 SMART LRR_sd22_2 663 689 - -
Bva05g02438 1119 SMART LRR_sd22_2 446 465 - -
Bva05g02438 1119 SMART LRR_sd22_2 302 328 - -
Bva05g02438 1119 SMART LRR_sd22_2 110 136 - -
Bva05g02438 1119 SMART LRR_sd22_2 590 616 - -
Bva05g02438 1119 Pfam Leucine rich repeat 256 315 IPR001611 GO:0005515
Bva05g02438 1119 Pfam Leucine rich repeat N-terminal domain 44 82 IPR013210 -
Bva05g02438 1119 Gene3D Ribonuclease Inhibitor 41 194 IPR032675 -
Bva05g02438 1119 SUPERFAMILY Protein kinase-like (PK-like) 798 1094 IPR011009 -
Bva05g02438 1119 Gene3D Ribonuclease Inhibitor 423 736 IPR032675 -
Bva05g02438 1119 Gene3D Transferase(Phosphotransferase) domain 1 899 1112 - -
Bva05g02438 1119 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 13 1105 - -
Bva05g02438 1119 SMART LRR_typ_2 254 278 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 663 687 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 614 638 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 302 326 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 374 397 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 110 134 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 206 230 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 566 590 IPR003591 -
Bva05g02438 1119 SMART LRR_typ_2 350 373 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02438 Bva-Chr5 18967705 18973158 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02438 45 1096 Receptor kinase-like Gene Family AT5G56040 37.089 0.0 637
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bva05g02438 Pkinase 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02438 - - gmx:100805792 1565.82