Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02437 ATGGAGTCCCTTTTTGTGGATGCATTGTTGGATTTCTCATCGGATGATGAGGAAGACAAACCCCAGAATGTCCTGCCTCCGCTTAACCCAAAATGCAGTGATCCAGCATCATTCAATGCTTTAGACCCAGATGATCCTAGCCAATCATTTTCAGAGTTTGCAGAAGAAGATCTTGAATGGATATCTAACAAAGATGCATTTCCTGCTGTGGAAACATTTGTCGACATACTTGCAATTCAACCCAACATATCAAGGCACCAAAATACAGTCTCAATGACTGAATACAGTACAAGCAGTACCAACAGTAATAACAGCAGTAACAGCAGTACCCTCTTAAACTGCTATGATCACCTTAAGGTCCCTGTTCGTGCACGGAGTAAGCGACGTAGCAGGTGTCGCCGTGGCCTTGGTGACATCTCCAGCCAATCATTCTGGTGGAGCCAAACGGATATCAAAGTTGCCAAAGCAGAGCCTGTAATAACAATTTCAATGATTGGGAGGAAATGCCAGCATTGTGGAGCAGAGAAAACTCCACAATGGCGGGCAGGACCCCTTGGGCCGAAAACGCTTTGTAATGCATGTGGGGTTCGGTATAAGTCAGGGAGGCTTGTGCCTGAGTATCGCCCAGCAAATAGCCCAACTTTTTGTAGTGACTCACATTCTAATTCGCACAGGAAGATAGTAGAGATGAGGAGACAGAAGCAAGAGGGAAAGATGTTTAAGGCCATGGATAAAGGCTA 740 0.4541 MESLFVDALLDFSSDDEEDKPQNVLPPLNPKCSDPASFNALDPDDPSQSFSEFAEEDLEWISNKDAFPAVETFVDILAIQPNISRHQNTVSMTEYSTSSTNSNNSSNSSTLLNCYDHLKVPVRARSKRRSRCRRGLGDISSQSFWWSQTDIKVAKAEPVITISMIGRKCQHCGAEKTPQWRAGPLGPKTLCNACGVRYKSGRLVPEYRPANSPTFCSDSHSNSHRKIVEMRRQKQEGKMFKAMDKG 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02437 246 Gene3D - 164 241 IPR013088 GO:0006355|GO:0008270
Bva05g02437 246 ProSitePatterns GATA-type zinc finger domain. 169 194 IPR000679 GO:0006355|GO:0043565
Bva05g02437 246 PANTHER GATA TRANSCRIPTION FACTOR 6 235 - -
Bva05g02437 246 SMART GATA_3 163 213 IPR000679 GO:0006355|GO:0043565
Bva05g02437 246 CDD ZnF_GATA 168 215 IPR000679 GO:0006355|GO:0043565
Bva05g02437 246 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 166 226 - -
Bva05g02437 246 ProSiteProfiles GATA-type zinc finger domain profile. 163 199 IPR000679 GO:0006355|GO:0043565
Bva05g02437 246 PANTHER GATA TRANSCRIPTION FACTOR 1 6 235 - -
Bva05g02437 246 Pfam GATA zinc finger 169 202 IPR000679 GO:0006355|GO:0043565
Bva05g02437 246 MobiDBLite consensus disorder prediction 11 49 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02437 Bva-Chr5 18948802 18952140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02437 1 237 C2C2-Gata Transcription Factor Family AT3G24050 43.525 2.30e-53 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Bva05g02437 GATA 8.8e-17 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02437 - - gmx:100784527 288.885