Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02351 ATGGCTGCTAAAGTCAGCTATGTAGTTGGATCAAATGTTTGGGTTCAGGACCCAGAGGAAGCTTGGATAGATGGAGAAATCGTGGAAGTCAATGGGAAAGATATCAAGATTAACAGTACGTCAGGGAAGATGGTTGTGGCCAAACCATCTAATATCTATCCCATGGATCCTGAGTTTCCTCCGTCTGGTGTCGAAGATATGACAAGGCTAGCCTATTTGCATGAGCCAGGGGTTCTCCACAATTTGAAATGTCGATATGATATAGATGAAATATATACATATACCGGAAGTATATTGATAGCTGTGAACCCTTTCCAAAGAATACCTCATTTGTATGCCAGTGATATGATGCAACGGTATAAGGGGATGGCTCTTGGTGAGCTGAGCCCACATCCTTTTGCAATTGCGGATAGTGCATATAGGATGATGATCAATGAAGGAGCAAGCCAATCCATTTTGGTCAGTGGAGAAAGTGGAGCTGGTAAAACTGAGAGTACAAAACTGCTAATGCAATATCTTGCCTATATGGGAGGGAGAAGCGGATCAGAGGGGCGTTCTGTGGAACAACAAGTTCTGCAGTCTAATCCTGTTTTGGAAGCATTTGGCAATGCGAAGACTGTTAGAAACAATAACTCAAGTCGTTTTGGTAAGTTTGTGGAGCTTCAGTTTGATCAAAGGGGGAGAATTTCTGGAGCTGCTATCAGAAGCTATTTGCTGGAAAAATCCCGTGTCTGTCAAGTTTCTGATCCAGAGCGAAACTATCATTGCTTTTATATGCTATGTGCTGCCCCAAAAGAGGTTGTTGATAGCTACAAATTGGGAAATCCAAgatcatttcattatttaaatcaatcaaatttcTACGAGCTGGAAGGGTTGGATGAAACTAAGGAATATCTTGAAACTAGGAGAGCAATGGGTGTTGTTGGCATCAATTCTAATGAGCAGGATGCTATATTTCGAGTAGTGGCTGCAATACTTCACTTAGGAAACATTGAATTTACCAAGGGAGATGAAGTGGATTCCTCTCAACCCAAGGATGATCAATCTCGTTTTCATCTCAAAACTGCAGCTGAACTTTTGATGTGTGATGTGAAATCTCTTGAGGACTCTTTCTGCAAACGTGTTATTGCTACACGTGGTGAGGCCATAACAAAATGTCTTGATCCAAATTCTGCTGCTCTGAGTAGAGATGCATTGGCTAAGATAGTTTATTCAAAACTGTTCGACTGGATTGTGAACAAGATTAACGAATCCATTGGCCAAGATCCGGATTCAAAGAACTTAATCGGGGTTCTGGATATATATGGATTTGAGAGTTTCAAGACAAACAGCTTTGAGCAATTTTGTATTAACTTGACTAATGAGAAATTGCAGCAGCATTTTAACCAGCATGTCTTCAAAATGGAGCAAGAAGAATATACAAAGGAAGAAATCGATTGGAGTTATATTGAGTTCGTTGATAATCAGGATATCCTTGATCTTGTTGAGAAGGTAATAGAAGCCTG 1508 0.3999 MAAKVSYVVGSNVWVQDPEEAWIDGEIVEVNGKDIKINSTSGKMVVAKPSNIYPMDPEFPPSGVEDMTRLAYLHEPGVLHNLKCRYDIDEIYTYTGSILIAVNPFQRIPHLYASDMMQRYKGMALGELSPHPFAIADSAYRMMINEGASQSILVSGESGAGKTESTKLLMQYLAYMGGRSGSEGRSVEQQVLQSNPVLEAFGNAKTVRNNNSSRFGKFVELQFDQRGRISGAAIRSYLLEKSRVCQVSDPERNYHCFYMLCAAPKEVVDSYKLGNPRSFHYLNQSNFYELEGLDETKEYLETRRAMGVVGINSNEQDAIFRVVAAILHLGNIEFTKGDEVDSSQPKDDQSRFHLKTAAELLMCDVKSLEDSFCKRVIATRGEAITKCLDPNSAALSRDALAKIVYSKLFDWIVNKINESIGQDPDSKNLIGVLDIYGFESFKTNSFEQFCINLTNEKLQQHFNQHVFKMEQEEYTKEEIDWSYIEFVDNQDILDLVEKVIEA 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02351 502 Gene3D - 11 55 IPR008989 GO:0003774|GO:0005524|GO:0051015
Bva05g02351 502 ProSiteProfiles Myosin motor domain profile. 62 502 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 SMART MYSc_2a 56 502 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PANTHER MYOSIN 5 498 - -
Bva05g02351 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 498 IPR027417 -
Bva05g02351 502 Gene3D Myosin VI head, motor domain, U50 subdomain 308 419 - -
Bva05g02351 502 Gene3D - 252 307 - -
Bva05g02351 502 Gene3D Kinesin motor domain 63 440 IPR036961 -
Bva05g02351 502 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 8 57 IPR004009 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PRINTS Myosin heavy chain signature 92 111 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PRINTS Myosin heavy chain signature 149 174 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PRINTS Myosin heavy chain signature 429 457 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PRINTS Myosin heavy chain signature 482 502 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PRINTS Myosin heavy chain signature 196 223 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 Gene3D - 441 498 - -
Bva05g02351 502 Pfam Myosin head (motor domain) 64 498 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02351 502 PANTHER IQ MOTIF, EF-HAND BINDING SITE-RELATED 5 498 - -
Bva05g02351 502 Pfam Myosin N-terminal SH3-like domain 10 52 IPR004009 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02351 Bva-Chr5 18010344 18017432 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02351 1 498 Myosins gene family AT1G04600 79.719 0.0 865
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02351 K10357 - mnt:21394610 849.351