Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02349 ATGATCACTGATGATCCATCGAGGTGGGTGGTGATAGACGAAGACCCACCTAGCCTGCGTGGATCACTGGTGGAGGACCCATTAGCAGACGACATGGTCAGTTTGGAAAAACCTGGCGGTATCATTGCTCTTCTGGATGAGGCTTGTATGTTTCCAAGATCAACACACGAGACATTTGCTGAAAAGCTATATCAAACTTTTAAAGACAATAAACGTTTCAGCAAGCCGAAGTTGTCTCGTACCGACTTCACCATTTGCCATTATGCTGGTGATGTGACTTATCAAACTGAGTTTTTCCTTGATAAGAACAAAGACTTTGTTGTTCCGGAGCATGAGGCACTGCTCGCTGCTTCTAAGTGCTCCTTTGTTTCAGGGTTGTTCCCTCCTTCACCTGAGGAAACTTCCAAAACAGCCAAGTTCTCTTCAATAGCCACCAAGTTCAAgCAACAACTGCAAGCTTTGCTTGAAACACTGAATGCTACTGAGCCACAATATGTTCGCTGTATAAAGCCAAATAATCTTCTTAAGCCAGGAATATTTAATAAGAGTACTGTGTTGCAGCAGCTTCAATGTGGGGGAGTCATGGAGGCAATTAGGATAAGCTGTGCTGGATTTCCCACTAGAAAGACCTTTAGTGAATTTATTCGCCGTTTTGGTGTTTTGTCACCTGAGGTTTTGAAAGGATGCCCTGATGAGGTGGCTGGTTGCAAGAATCTTCTAGAGAAAGTGAACCTGAAAGGCTATCAGATTGGCAAGACTAAAGTGTTTCTGAGAGCAGGTCAGATGGCAGAACTAGATGCATTTCGAGCTGAAGTCTTAGGAAGATCAGCAGCCATTATTCAGAGGAGAGTTCGCACATATTATTGTCGTAAAAACTTCATTTTGTTGAGGTTATCTGCCATACAAATACAAACCATTTGTCGAGGACAACTTGCACGCCGTCGTTATGAACACTTGAGGAGGGAAGATGCCTCTgtgaaaatccaaaaaaacTGTCGGATGTCTCTTGCTAGAAACGCTTACAGAAGTCTGTACACATCAGCTCTTTGTATTCAAACCTGTATGCGACGAATGGCTGCTCAAAATGAGCTGGATTTCAGGAAGCAGAACGCTGCTGCAGTTATCATTCAAAGTCATTGCAGACGTTTTATAGCTCGCATCCGTTACCTAAGGCTAAAGAAAGCAGCAATCACTGCACAGTGTTGgtggagaagaaaaattgcaaGTAGAGAACTTCGAAAACTTAAAATGGCTGCTAAGGAAGCAGGTGCTCTCAAAGAAGCCAAAATTAAACTAGAACAGGAAGTTGAAGAACTGACTTTCAATCTAGAATTCGAGAAAAAGATGAGGGCTGATATTGAGAAAGCAAAGACGGAAGAGATTTCCAAATTGCAAGCTGCTTTACAAGAGGTGCAGCTTCAGTTTGAAGAAACTAATGAAGCAAAGACGCAGGAGAATACCAAATTGCAAGCTGCTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACTAAGGAAGCAATGACGCAGGAGAATACCAAATTGCAAGCTGATTTACAAGAGATGCAGCTTCAGTATGAAGAAACTAAGGAAGCAAAGGCACAGGAGATTACCAAATTGCAAGATGCTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACTAAGGAAGCAATGACGCAGGAGAATACCAAATTGCAAGCTGCTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACTAAGGAAGCAATGATGCAGGAGAATACCAAATTGCAAGCTGGTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACTAAGGAAGCAATGACGCAGGAGAACACCAAATTGCAAGCTGATTTACAAGAGATGCAGCTTCAGTATGAAGAAACTAAGGAAGCAAAGGCACAGGAGATTACCAAATTGCAAGATACTTTACAAGAGATGCATCTTCAGTTTGAAGAAACTATGGAAACGAAGACACTGGAGATTACCAAATTGCAAGATGCTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACCAAGGAAACGAAGACACTGGAGATTACCAAATTGCAAGATGCTTTACAAGAGATGCAGCTTCAGTTTGAAGAAACCAAGGAAGCAAAGACGCAGGAGACTGCCAAATTGCAAGCTGCTTTACAAGAGATGCAGCTTCAGATCGAAGAAACTAAGGAAGCAAAGATGCAGGAGATTACCAAATTGCAAGCTGCTTTACAAGAGAAGCAGCTTGAGTTTGAAGAAACTAAGGCACTGCTCAGTCAGGAGAGTGAGGCTGTGAAAGAGGCATCTGATCAAAGTCCAATTATGCAGGAGGTTCCTGTTAGTGATAATGAACTAATCAATAAGCTTAGAGCAGAAATTGAAAGTCTAAAGACAAGTGAGGCTGCAAGAAAAGCAGCTGAACAAAGTCCAATTATGCAGGAGGTTCCTGTTACTGATAATGAATCGATGAATAAGCTTAcatcagaaaatgaaaatctaaaGGTGCAAGAGTCTGCAGAAAAGGCAGCTGAGCAAAGTCCAATTATGCAGGAGGTTCCTGTTACTGATAATGAATTGATCAATATACACAcatcagaaaatgaaaatctaagGGTGCAAGAGTCTGCAATAAAGGCAGCTGAGCAAAGTCCAGTTATGCAGGAGGTTCCTGTTACTGATAATGAATTGACCAATAAGCTAAcatcagaaaatgaaaatctaaaaGTGGAAGAGTCTGTGGAAAAAGCAGCTGAGCAAAGTCCAATTATGCAGGAGGTTCCTGTTATCGATATTGATTTGATCCATAAACTTAcagcagaaaatgaaaatctaaagGCACTGGTTAAttcattagaaaagaaaattgatgaaacagAGAGGAAATATGAAGAGTGTAACAAGCTTAGTGAAGAGCGCTTGAAGCAAGCTACAGATGCTGAACTGAAGATAATTCAGCTGAAGACATCCATGCAGAGAGTTCAAGAAAAACTCTCTGATATTGAAACTGAGGATCAGATTCTAAGGCAGCAAGCACTAAAATCAGCTTCTAAGAGAATGTCTGGACGTTTCTCATTTAAATCTCTGGCTTCGGAAAATGGTGATCATGAACCAGAGAGTCCCGCAAAAAAGTTTGGGACAGAGGCTGATGCAAACTTAAGAAAATCTATGATTGAAAGGCAACAAGAAAGTGTAGATATCCTCCTCAAGTTTTTAGCAGAAGACCTTGGGTTCAGTGACGGGAAACCAGTTGCAGCATTCACCATTTATAAGTGTCTGCTTCACTGGAAATCTTTTGAAGCAGAAAAGACAGGTGTATTTGATCGTCTTATTCAGTTGATTGGCTCTGCTATAGAGGATCAGGAGGATAATGATCGTATGTCTTATTGGTTATCTAATAGTTCTGGTTTGTTGTACATTCTTCAGCGAAGTTTGAGAACTGCAGCACGGAAACCTCCAACTCCCGCTGGGTTTTTTGGGAGGATGACCCAGAGTCTCCGTTCATCTTCCATCAGTCTTTCTAGTAATGCACTTACTGTAATACGCATGGTTGATGCCAAGTATCCAGCCTTGCTTTTCAAGCAGCAGCTTACAGCATATGTAGAAAAGATTTATGGGATCATTCGGGACAATTTGAAGAAGGACTTATCACCCCTACTTTCTTCTTGTATTCAGGCACCAAAAACATCTGGGGAAACAGGATCATCTGAACAGTCAGATAGCAATAGTCCACCAGCTAGTTCTTGGCACAATGTCATTGACTGCCTCAATAGGTTTTTCAATACATTGAAAGAAAACTATGTGTCTCCTGTTCTTATGCAGAAGTTATTTACTCAGGTTTTCACGTATATCAATGTCCAACTACTTAATAGCCTTCTTCAAAGTCCTGAACGCTGTACTTTCAGCAATGGGGAATATATTAAATCTGGGTTAGCTGAAATGGAAAAATGGTGTGATGAAGCAAGTTATGAtTTTGTTGCCGCATCTTGGGATGAACTCAAACATATTAGGCAAGCAGTTAACTTCACGGTTATAAATCAGAAGTCTGAAGTATCTTACAATGACCTTACACATAATTTGTGCCCTATCCTGGGAGTTCAACAGCTCCATAGACTATGTACAATGTTCTCGGATGACAGTgacaatacaaaaaatatatcaccTGAAGTCATTTCTAGCATGAAGCTTCTAATGACAGACGACGATGCAAACAATGAGGAGAACTCCTTCTTGTTGGATGACCTTTCCAGTGTTCCTTTCGCCATGGACGAGATCATTAACTCCCTTCACGATAAGACCTTTAGAGATGCAAAACCTCCAGCAGAACTACTTGAGTATCCAGCCTTTGAATTTTTACAGTA 4355 0.3966 MITDDPSRWVVIDEDPPSLRGSLVEDPLADDMVSLEKPGGIIALLDEACMFPRSTHETFAEKLYQTFKDNKRFSKPKLSRTDFTICHYAGDVTYQTEFFLDKNKDFVVPEHEALLAASKCSFVSGLFPPSPEETSKTAKFSSIATKFKQQLQALLETLNATEPQYVRCIKPNNLLKPGIFNKSTVLQQLQCGGVMEAIRISCAGFPTRKTFSEFIRRFGVLSPEVLKGCPDEVAGCKNLLEKVNLKGYQIGKTKVFLRAGQMAELDAFRAEVLGRSAAIIQRRVRTYYCRKNFILLRLSAIQIQTICRGQLARRRYEHLRREDASVKIQKNCRMSLARNAYRSLYTSALCIQTCMRRMAAQNELDFRKQNAAAVIIQSHCRRFIARIRYLRLKKAAITAQCWWRRKIASRELRKLKMAAKEAGALKEAKIKLEQEVEELTFNLEFEKKMRADIEKAKTEEISKLQAALQEVQLQFEETNEAKTQENTKLQAALQEMQLQFEETKEAMTQENTKLQADLQEMQLQYEETKEAKAQEITKLQDALQEMQLQFEETKEAMTQENTKLQAALQEMQLQFEETKEAMMQENTKLQAGLQEMQLQFEETKEAMTQENTKLQADLQEMQLQYEETKEAKAQEITKLQDTLQEMHLQFEETMETKTLEITKLQDALQEMQLQFEETKETKTLEITKLQDALQEMQLQFEETKEAKTQETAKLQAALQEMQLQIEETKEAKMQEITKLQAALQEKQLEFEETKALLSQESEAVKEASDQSPIMQEVPVSDNELINKLRAEIESLKTSEAARKAAEQSPIMQEVPVTDNESMNKLTSENENLKVQESAEKAAEQSPIMQEVPVTDNELINIHTSENENLRVQESAIKAAEQSPVMQEVPVTDNELTNKLTSENENLKVEESVEKAAEQSPIMQEVPVIDIDLIHKLTAENENLKALVNSLEKKIDETERKYEECNKLSEERLKQATDAELKIIQLKTSMQRVQEKLSDIETEDQILRQQALKSASKRMSGRFSFKSLASENGDHEPESPAKKFGTEADANLRKSMIERQQESVDILLKFLAEDLGFSDGKPVAAFTIYKCLLHWKSFEAEKTGVFDRLIQLIGSAIEDQEDNDRMSYWLSNSSGLLYILQRSLRTAARKPPTPAGFFGRMTQSLRSSSISLSSNALTVIRMVDAKYPALLFKQQLTAYVEKIYGIIRDNLKKDLSPLLSSCIQAPKTSGETGSSEQSDSNSPPASSWHNVIDCLNRFFNTLKENYVSPVLMQKLFTQVFTYINVQLLNSLLQSPERCTFSNGEYIKSGLAEMEKWCDEASYDFVAASWDELKHIRQAVNFTVINQKSEVSYNDLTHNLCPILGVQQLHRLCTMFSDDSDNTKNISPEVISSMKLLMTDDDANNEENSFLLDDLSSVPFAMDEIINSLHDKTFRDAKPPAELLEYPAFEFLQ 1451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02349 1451 Gene3D - 32 161 - -
Bva05g02349 1451 Coils Coil 933 970 - -
Bva05g02349 1451 SMART iq_5 368 390 IPR000048 GO:0005515
Bva05g02349 1451 SMART iq_5 295 317 IPR000048 GO:0005515
Bva05g02349 1451 SMART iq_5 272 294 IPR000048 GO:0005515
Bva05g02349 1451 SMART iq_5 320 342 IPR000048 GO:0005515
Bva05g02349 1451 SMART iq_5 391 413 IPR000048 GO:0005515
Bva05g02349 1451 Gene3D - 204 271 - -
Bva05g02349 1451 ProSiteProfiles IQ motif profile. 369 398 IPR000048 GO:0005515
Bva05g02349 1451 PANTHER MYOSIN 36 635 - -
Bva05g02349 1451 PANTHER MYOSIN 917 1450 - -
Bva05g02349 1451 Coils Coil 454 649 - -
Bva05g02349 1451 CDD MyosinXI_CBD 1057 1421 IPR037975 GO:0007015
Bva05g02349 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 323 420 IPR027417 -
Bva05g02349 1451 Pfam DIL domain 1274 1377 IPR002710 -
Bva05g02349 1451 PANTHER MYOSIN-7 36 635 - -
Bva05g02349 1451 PANTHER MYOSIN-7 917 1450 - -
Bva05g02349 1451 Coils Coil 415 449 - -
Bva05g02349 1451 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 321 IPR027417 -
Bva05g02349 1451 SMART MYSc_2a 2 271 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02349 1451 ProSiteProfiles Dilute domain profile. 1106 1398 IPR002710 -
Bva05g02349 1451 Pfam Myosin head (motor domain) 36 258 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02349 1451 MobiDBLite consensus disorder prediction 1225 1245 - -
Bva05g02349 1451 Coils Coil 654 756 - -
Bva05g02349 1451 Gene3D - 370 420 - -
Bva05g02349 1451 Gene3D - 273 322 - -
Bva05g02349 1451 Gene3D - 323 369 - -
Bva05g02349 1451 Gene3D Myosin VI head, motor domain, U50 subdomain 106 139 - -
Bva05g02349 1451 ProSiteProfiles IQ motif profile. 296 325 IPR000048 GO:0005515
Bva05g02349 1451 SMART DIL_2 1273 1380 IPR002710 -
Bva05g02349 1451 ProSiteProfiles IQ motif profile. 321 347 IPR000048 GO:0005515
Bva05g02349 1451 ProSiteProfiles Myosin motor domain profile. 1 270 IPR001609 GO:0003774|GO:0005524|GO:0016459
Bva05g02349 1451 Gene3D Kinesin motor domain 162 200 IPR036961 -
Bva05g02349 1451 Coils Coil 975 1009 - -
Bva05g02349 1451 Pfam IQ calmodulin-binding motif 323 342 IPR000048 GO:0005515
Bva05g02349 1451 Pfam IQ calmodulin-binding motif 299 316 IPR000048 GO:0005515
Bva05g02349 1451 Pfam IQ calmodulin-binding motif 371 389 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02349 Bva-Chr5 17992112 18004834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02349 37 577 Myosins gene family AT1G04600 60.259 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02349 K10357 - ini:109176507 1351.27