Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02343 ATGGAAGATGCTTCCCTTTGTGGTGAACAAGTGCCAGACACTGAATGCCATGAAGTtcagaaagaagaagatggcGTATTAACTGAATTGGATTgtcaaaatgattttcttcaaGGAAGAAAGGAATTTGTTGCACCTGCTGTTGGTATGGAGTTTGAGTCATATGATGAtgcttataattattatatctgCTATGCCAAAGAAGTGGGATTTCGTGTAAGGGTGAAGAATTCATGGTTCAAGCGAAATAGCAGAGAAAAATATGGTGCAGTGCTATGCTGCAGCAGCCAGGGTTTCAAAAGAGTGAAAGATGTTAGCCATTTGAGAAAGGAAACAAGAACAGGTTGCCCTGCAATGATAAGGATGAGGCTAGTGGACTCACAAAGATGGAGAGTACTTGAAGTTACACTTGAACATAACCACCTGTTAGGTGctaaaatatacaaatcaaCTAAGAAGATGGGCATTGGAGCCAAAAGGAAATCACTGCCTAGTTCTGATGCTGAAGTGCAGACAGTTAAGTTATATCGTGCTCTTGTGATAGATAATGGATGTAATGGTACCATAAATTCTGGTGCTACAGAAGTCACAGCCCTTGCTGATCTTCCTAATAGGTTAAACCTTAAAAAGGGTGACACACAAACCATTTATAACTACCTCTGCCGTATGCAGTTGACTAATCCAAACTTCTTTTACTTGATGGATTTCAATGATGAAGGCCATTTGAGAAATGCATTTTGGGTTGACGCTAGATCTAGGGCTGCATGTGCTTATTTTGGtgatgttatttattttgacagcacatatttatcaaacaaatatgaaatcCCACTTGTCACATTTGTTGGAATTAATCACCATGGCCAGTCAGTGTTGTTGGGTTGTGGCCTGCTTGCAGGTGAAACGCTAGAGTCTTATCTATGGTTATTCAGAACATGGGTTACATGTATGTCTGGATGTAGCCCACAAACCATTATCACTGATAGATGTAAGGTTTTGCAGAGTGCAATTGCTGAAGTTTTTCCTAGATCTCATCACCGTTTTGGCTTGTCATTGATCATGAAAAAAGTACCAGAGAAGTTGGGGGGATTGTGTAATTATGATGCAATAAGGAAAGGGCTGATTAAAGCAGTTTATGAAACATTGAAGGTGATTGAATTTGAAGCTGCATGGGGGTTTATGATTCAGCGATTTGGCATCACGGATCATGAGTGGCTTCGTTCTCTATATGAAGATCGAGTTCATTGGGCACCAGTATACTTGAAGGACACATTTTTTGCTGGAATGTCAGCAGCACGTCCTGGTGAGACACTGAATCCATGTTTTGATAGATATGTGCACAAGCAAACTCCTTTAAAGGAATTTCTTGATAAGTATGAATTAGCTCTCCAAAAGAAGTACAAGGAAGAATCTGTTGCAGATATTGCCTCAAGAAAACCAAATCCCTCACTGAAAACAAGATGTCCTTTTGAATTGCAGCTCTCTAGAGTGTACACAGAAGAAATATTCTTGAAGTTCCAATTTGAAGTGGAAGAAATGTATTCTTGTTTTAGTACTACACAATTACATGTGGATGGtccaattataatatttttggtaaagGAGCGTGTTTTGAGTGAGGGAAATAGGAGGGAGATTAGggattttgaagttttatacAACAGGACAGCAGGTGAGATTCGCTGCATCTGTAGCTGCTTTAACTTTTATGGATATTTATGTCGCCATGCTCTATGTGTACTCAATTTTAATGGGGCGGAGGAGATACCTTCTAAGTACATTCTTTCGCGTTGGAAAAAGGACTACAAACGCCTGCATCTTCCTGATCATTGCTCTGGTAATGTCAATAGTAGTGATCGTTTTCAATGGTTTAACCAGTTATATAGAAGTGCCTTGCAAGTTGCCGAGGAGGGGACAATTTCTCTAGATCATTACAATGTAGCATTGCAAGCTTTTGAGGAATCACTGAGCAGGGTTCATGATGTAGATCAGAGATA 1997 0.3726 MEDASLCGEQVPDTECHEVQKEEDGVLTELDCQNDFLQGRKEFVAPAVGMEFESYDDAYNYYICYAKEVGFRVRVKNSWFKRNSREKYGAVLCCSSQGFKRVKDVSHLRKETRTGCPAMIRMRLVDSQRWRVLEVTLEHNHLLGAKIYKSTKKMGIGAKRKSLPSSDAEVQTVKLYRALVIDNGCNGTINSGATEVTALADLPNRLNLKKGDTQTIYNYLCRMQLTNPNFFYLMDFNDEGHLRNAFWVDARSRAACAYFGDVIYFDSTYLSNKYEIPLVTFVGINHHGQSVLLGCGLLAGETLESYLWLFRTWVTCMSGCSPQTIITDRCKVLQSAIAEVFPRSHHRFGLSLIMKKVPEKLGGLCNYDAIRKGLIKAVYETLKVIEFEAAWGFMIQRFGITDHEWLRSLYEDRVHWAPVYLKDTFFAGMSAARPGETLNPCFDRYVHKQTPLKEFLDKYELALQKKYKEESVADIASRKPNPSLKTRCPFELQLSRVYTEEIFLKFQFEVEEMYSCFSTTQLHVDGPIIIFLVKERVLSEGNRREIRDFEVLYNRTAGEIRCICSCFNFYGYLCRHALCVLNFNGAEEIPSKYILSRWKKDYKRLHLPDHCSGNVNSSDRFQWFNQLYRSALQVAEEGTISLDHYNVALQAFEESLSRVHDVDQR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02343 665 Pfam MULE transposase domain 262 356 IPR018289 -
Bva05g02343 665 Pfam FAR1 DNA-binding domain 60 143 IPR004330 -
Bva05g02343 665 ProSiteProfiles Zinc finger SWIM-type profile. 549 585 IPR007527 GO:0008270
Bva05g02343 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 663 IPR031052 GO:0006355
Bva05g02343 665 SMART 26again6 560 587 IPR006564 GO:0008270
Bva05g02343 665 PANTHER PROTEIN FAR1-RELATED SEQUENCE 6 19 663 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02343 Bva-Chr5 17928209 17933455 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Bva05g02343 MULE 9.2e-29 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02343 K17604 - gmx:100796448 1153.66