Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02334 ATGGGAAAAATCCCACATTCCATGGGGAATCTTTCTTcccttagaattttttatgcagATATTAATAACTTGGAGGGCAACATACCAGATGAAATAAGAAACCAGCTCAATGGCTCTCTTCCAGACGACATGTTTCTCACCCTCCCTAATCTCAACACTTTGGCTATTGGTGGAAATCATATGACAGTTACAACTTTGACATGTTGCTCCAGCATAAATTACAAAGGGCAAGAATTTAAGGCTCTAGTTTTTGATTACATGATGAATGGAAGCCTAGAAAAATGGTTGCATCCAGGTACAGAAAGTGCCAATCAGCCAACAACTTTAAGCCTTGTTCAAAGAGTAAATATTATTGCTGACATTTCTGGTGCATTACATTATCTCCACTATGAATGCGAGCAACCCATAATTCATTGTGATTTAAAGCCAGAAAATGTCCTTGATCATGACATGGTTGTTCATGTGGGCAATTTTGGGTTGGCAAGACTTCTCTCAACAATTAATGGCACCTCTCAAAAGCAAACCAGCTCAACCCTATTTAAGGGGACTGTTGGCTATGCTCCTCCAGAATATGACATGGGTTCTGATGTGTCAACACGAGGAGATGTCTATAGCTTTGAAATTCTTGTGTTGGAAATGTTAACTGGTAGAAGACCCACAGAGGAAATTTTCATAGATGGTGAAATTCTCCATAGCTATGTTAAAACTGCATACCCAGATAACCGGTTTTCTGCAGATTGTGGATCCATCTATTTTCCATG 761 0.3837 MGKIPHSMGNLSSLRIFYADINNLEGNIPDEIRNQLNGSLPDDMFLTLPNLNTLAIGGNHMTVTTLTCCSSINYKGQEFKALVFDYMMNGSLEKWLHPGTESANQPTTLSLVQRVNIIADISGALHYLHYECEQPIIHCDLKPENVLDHDMVVHVGNFGLARLLSTINGTSQKQTSSTLFKGTVGYAPPEYDMGSDVSTRGDVYSFEILVLEMLTGRRPTEEIFIDGEILHSYVKTAYPDNRFSADCGSIYFP 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02334 253 Gene3D Transferase(Phosphotransferase) domain 1 87 248 - -
Bva05g02334 253 ProSiteProfiles Protein kinase domain profile. 1 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02334 253 Gene3D Ribonuclease Inhibitor 1 81 IPR032675 -
Bva05g02334 253 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 63 241 - -
Bva05g02334 253 SMART serkin_6 18 252 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02334 253 SUPERFAMILY L domain-like 4 64 - -
Bva05g02334 253 SUPERFAMILY Protein kinase-like (PK-like) 59 224 IPR011009 -
Bva05g02334 253 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 2 61 - -
Bva05g02334 253 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 63 241 - -
Bva05g02334 253 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE EFR 2 61 - -
Bva05g02334 253 Pfam Protein kinase domain 77 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02334 Bva-Chr5 17880155 17882564 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02334 63 240 Receptor kinase-like Gene Family AT3G47090 52.198 1.45e-56 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva05g02334 Pkinase 2e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02334 - - ccaj:109792361 261.536