Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02329 ATGGCGGAGTTGGCCACTTGCGCCAGCGACCTGGCCCAGCACCTGGGTGCCAACACCACCAACGCCATGGCTGCCGCTAATTTAATCTGCGATCTGTTCTCCGCCGTCTCAAACAATTTCACCGATACCGCCTATGCTATCGATAACACTTACCTTCTGTTCTCTGCTTATCTGGTCTTCTCCATGCAGCTTGGCTTCGCCATGCTCTGCGCCGGCTCTGTTCGCGCCAAAAACACCATGAACATCATGTTGACCAACGTGCTTGATGCCGCCGCCGGTGGGATCTTCTACTACCTCTTTGGCTTTGCTTTTGCCTTCGGAGGCCCCTCCAACGGCTTCATCGGCCGCCATTTTTTTGGGCTCAGGGATGttccttcttcctcctttgATTACAGCAACTTTCTATACCAATGGGCTTTTGCCATCGCCGCCGCCGGCATCACCAGCGGCTCCATCGCTGAACGGACCCAGTTCGTGGCTTACCTTATTTACTCTTCTTTTCTAACCGGGTTCGTTTACCCGGTCGTTTCTCACTGGTTCTGGTCCGCCGACGGTTGGGCAAGCGCATTTAAGCAGGATAATCTTTTATTCGGTTCTGGAGTCATTGATTTCGCCGGTTCGGGGGTGGTTCATATGGTCGGCGGCATCGCGGGTCTCTGGGGTGCGCTCATTGAAGGACCCAGAATTGGTCGCTTCGACCATACCGGACGAGCCGTCGCTCTCCGTGGGCACAGTGCTTCTTTGGTTGTCCTTGGAACCTTCTTGCTCTGGCTCGGGTGGTACGGGTTTAACCCGGGTTCGTTTAATAAGATTTCGGTCGCCTACAGTTCCGGAAACTACTATGGACAGTGGAGCGCAGTGGGGAGAACCGCCGTGACCACCACCTTAGCCGGTAGCACTGCCGCGTTGACAACACTCTTCGGGAAGAGGATTCTGTCTGGTCACTGGAATGTGACCGATGTGTGTAACGGGTTACTGGGTGGTTTCGCGGCCATCACTTCGGGGTGCTCGGTGGTGGAACCGTGGGCGGCGATTATTTGTGGGTTTATAGCGGCGGTTGTTTTGATCTCCTGCAATAAGCTGGCAGAGATGGTAAAGTTCGACGACCCATTGGAGGCGGCGCAACTACACGGTGGCTGCGGCGCGTGGGGGATAATCTTCACTGCCTTGTTTGCAAAGGAGTCCTACGTGAGTGAAGTATACGGTAAGGGTCGGCCATACGGGTTGTTCACGGGCGGTGGTGGAAAGCTTCTGGCGGCTCACATAATTCAGATTCTGGTAATTACTGGGTGGGTCAGCGCCACCATGGGCCCTCTCTTCTTTGTTCTTCACAAGCTGAAACTTCTCCGGATCTCGCCGGAGGACGAAATGGCAGGTATGGATATGACCCGACATGGTGGGTTTGCGTACGTGTACGAGGATGAGTCACACAAGCATGATGGGATTCAGATGAGAAAAATTGAGCTGAACACTCTCACCACAAATTA 1487 0.5367 MAELATCASDLAQHLGANTTNAMAAANLICDLFSAVSNNFTDTAYAIDNTYLLFSAYLVFSMQLGFAMLCAGSVRAKNTMNIMLTNVLDAAAGGIFYYLFGFAFAFGGPSNGFIGRHFFGLRDVPSSSFDYSNFLYQWAFAIAAAGITSGSIAERTQFVAYLIYSSFLTGFVYPVVSHWFWSADGWASAFKQDNLLFGSGVIDFAGSGVVHMVGGIAGLWGALIEGPRIGRFDHTGRAVALRGHSASLVVLGTFLLWLGWYGFNPGSFNKISVAYSSGNYYGQWSAVGRTAVTTTLAGSTAALTTLFGKRILSGHWNVTDVCNGLLGGFAAITSGCSVVEPWAAIICGFIAAVVLISCNKLAEMVKFDDPLEAAQLHGGCGAWGIIFTALFAKESYVSEVYGKGRPYGLFTGGGGKLLAAHIIQILVITGWVSATMGPLFFVLHKLKLLRISPEDEMAGMDMTRHGGFAYVYEDESHKHDGIQMRKIELNTLTTN 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02329 495 ProSitePatterns Ammonium transporters signature. 203 228 IPR018047 GO:0008519|GO:0016020|GO:0072488
Bva05g02329 495 TIGRFAM amt: ammonium transporter 48 470 IPR001905 GO:0008519|GO:0016020|GO:0072488
Bva05g02329 495 Pfam Ammonium Transporter Family 51 470 IPR024041 GO:0008519|GO:0016020|GO:0072488
Bva05g02329 495 PANTHER AMMONIUM TRANSPORTER 1 MEMBER 1 5 490 - -
Bva05g02329 495 Gene3D Ammonium transporter AmtB like domains 14 489 IPR029020 -
Bva05g02329 495 PANTHER AMMONIUM TRANSPORTER 5 490 - -
Bva05g02329 495 SUPERFAMILY Ammonium transporter 45 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02329 Bva-Chr5 17843706 17845403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02329 4 488 Inorganic Solute Cotransporters AT4G13510 80.738 0.0 808
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02329 K03320 - qsu:112032805 820.076