Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02324 ATGGGTAACTTAATCATTGTCTTCCTCATCCTCTTATCAATCTCATACACCTTTGCAGCTATAGTATCAAAGGATGGCAGTGAAGATTATACAACCATAGCTGAAGCTATAGCACAAGCTCCTACTTTCAGTGCCAAACCATACATCATCCTCGTTCGAGCTGGAATATATGAGGAGTATCTCATTGTTCCATATGAAAAAACTAACATAAGGCTCACTGGGGATGGTGTTAAATGCACAAGGATTGTTGGGTATCGCAGCACTTCTGGATCACTTATCCCAGTGAATCAAAGTGCTACAATAGGTACGCTTTTTCCCATTTACTGTAACTGTACAATTATTCGAGGGAAAAAGATCTTACAGTTCGTCAGTGAGGGCATGGATCTGAGTAACAATTCATACGACTGTGACGATAGCCCAGTAGACATCAACTGGGATTTGCTCAATGGTAGAGTGGAGATCAAACATCTAACCCCCTTAATGGGGCTAGGCATGGCGCCAGAGAGCACCCAAGCCCGACCCCAAACACCGCGGATGGACTTTATCCAGCTCACGCCAGCACCAAGATA 569 0.4411 MGNLIIVFLILLSISYTFAAIVSKDGSEDYTTIAEAIAQAPTFSAKPYIILVRAGIYEEYLIVPYEKTNIRLTGDGVKCTRIVGYRSTSGSLIPVNQSATIGTLFPIYCNCTIIRGKKILQFVSEGMDLSNNSYDCDDSPVDINWDLLNGRVEIKHLTPLMGLGMAPESTQARPQTPRMDFIQLTPAPR 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02324 189 Pfam Pectinesterase 20 102 IPR000070 GO:0030599|GO:0042545
Bva05g02324 189 PANTHER PECTINESTERASE 5 95 - -
Bva05g02324 189 SUPERFAMILY Pectin lyase-like 19 91 IPR011050 -
Bva05g02324 189 MobiDBLite consensus disorder prediction 165 189 - -
Bva05g02324 189 PANTHER PECTINESTERASE 5 95 - -
Bva05g02324 189 Gene3D - 18 140 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02324 Bva-Chr5 17798666 17799235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02324 20 87 Carbohydrate Esterase AT3G43270 42.647 6.55e-13 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02324 K01051 - gmx:102665195 90.5077