Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02322 ATGGGTAACTTAATCATTGTCTTCCTCATCCTCTTATCAATCTCATACACCTTTGCAGCTATAGTATCAAAGGATGGCAGTGAAGATTATACAACCATAGCTGAAGCTATAGCACAAGCTCCTACTTTCAGTGCCAAACCATACATCATCCTCGTTCGAGCTGGAATATATGAGGAGTATCTCATTGTTCCATATGAAAAAACTAACATAAGGCTCACTGGGGATGGTGTTAAATGCACAAGGATTGTTGGGTATCGCAGCACTTCTGGATCACTTATCCCAGTGAATCAAAATCTCGCCTTTGCCAATGGTGGAGGCCCAGATGCTGGCCCAGGAGTAGCCGTTCTCAACGTAGGAGACAAGACAGCATTCTACAAGTGCTCATTCGAGGGGTATCAAGATACCTTATGGGCAGGTTCTGGTCGCCAATTTTACAGGCAATGCAACATCTATGGCACAGTTGATTTCATATTGGGAAATGCAGCTGCAGTGTTTCAAAACTGCATGTTATATGCTAGATACAATGAATTCTTGGTATTCACCGCTCAATCTCGCGAAAACCAGGATCAGCAAACAGGCTTTGTGTTTCAGAATTGCAAGTTCACCATGTCTCCTGAGGACTCTGATAGGAAATCTGAGGTGATAAGAGCAAGTTTAGGTCGACCATGGAGGGCTTATTCTAGGGTTGTTATATTGTTTTCCTATATTGATTCATTGATAGATCCAAGAGGGTGGGAAATGTATAGAACAGTACCCACTAATAGATTGAGCTATATAGAGTTTGGGAATGAAGGACCTGGCTCAAGGACAAATGGAAGGGTGAATTGGCCTGGTGTTAAAGTGTTTTATGATAAAAGTGAAGTAGAAGGATTTACTGTATCAGTGTTTCTGAGCGGAGATACTTGGATTCCCCAAACTGGGATTCCATGCAATAAAGGATTATA 944 0.4195 MGNLIIVFLILLSISYTFAAIVSKDGSEDYTTIAEAIAQAPTFSAKPYIILVRAGIYEEYLIVPYEKTNIRLTGDGVKCTRIVGYRSTSGSLIPVNQNLAFANGGGPDAGPGVAVLNVGDKTAFYKCSFEGYQDTLWAGSGRQFYRQCNIYGTVDFILGNAAAVFQNCMLYARYNEFLVFTAQSRENQDQQTGFVFQNCKFTMSPEDSDRKSEVIRASLGRPWRAYSRVVILFSYIDSLIDPRGWEMYRTVPTNRLSYIEFGNEGPGSRTNGRVNWPGVKVFYDKSEVEGFTVSVFLSGDTWIPQTGIPCNKGL 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02322 314 PANTHER PECTINESTERASE 6 312 - -
Bva05g02322 314 Gene3D - 18 314 IPR012334 -
Bva05g02322 314 SUPERFAMILY Pectin lyase-like 19 310 IPR011050 -
Bva05g02322 314 Pfam Pectinesterase 20 300 IPR000070 GO:0030599|GO:0042545
Bva05g02322 314 PANTHER PECTINESTERASE 6 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02322 Bva-Chr5 17777537 17778992 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02322 22 314 Carbohydrate Esterase AT4G02300 42.581 2.38e-76 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02322 K01051 - gmx:102665195 347.436