Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02301 ATGTCAGTTGTCGTCGTCCGTTCGGCCGCAGGTAATCTTGCGGAACTACTTGGATCAGTTGGCCGTCAGATTGGTTACTTGATTTTCTGGGAGAAATATGTTGAGGATCTCAGGGAGCAGTTGAAGAAACTGCTGGaagcaagagagagagatgaggTTGACATTACAGAGGCTAGGCggaatggaaaagaaattgtgaATGATGTCCAGTATTGGCTCAGCTCAGTGGATGAGATCATCGAGATGGCAGAGAAATTGTTTGAGGACGCAAGCCACGCGAAGACCAAGTTTTGCAATTCCCCATTCTTCCATCACCAACTCCGTAGAAAAGCTAGGAAGATTACTAACGATGCTTCTGAACTCCAGGCTCAAGGTGTATTTGCGTGTGTTTCCCGTCTCCccatttcttcctttcccGACGATTTGAAGGAGTTTGAGTGGAGGATGCCGATTTTTTATGGTGTGATGGAAGCAATTGAAGACCCCAATATCCAAGTGATTGGGATCGGTGGAATGCCGGGCGTGGGGAAGACCACGCTAATCAAACAAATTGCCAAGCAAGCTAAAACTAATCGTTTATTTGACCGAGTAGTTATGGCAGTTGTCTCCGCTTATCCTGATGTGAGACGAATTCAACACCAAATTGCAGATATGTTGGGTTTGAACTTAACAGAAAAATCAACAACAGTAAGGGCGTGCCGATTTTATAAGAGGTTGAATCAGGAGGAGCGGCTGCTTATAATTTTGGATGATGTCTGGTACCGTCTTGATTTGGGGCAAATTGGAATTCCCAAAGGTTTAAAAATCGTTCTGACTAGCAGAGATCAGAATGTGTTACACCAAATGGAAGCTCAGAAGATATTTTGTGTTGAACCTTTGCTGCACAATGAAGCTGTCTCTTTCTTCCTGAAGTTCTCCGGTATTACCGATGACGTTGAATCTCATTCTGATCCGAGGTATCGTGAATTGGCAGTTGATATAGCACACAGATGTGGAGGTTTGCCTGTACTACTAGAGATGGTGGCAAGAGGACTAAAAAACAAGACGTACTTCCAATGGAAGGATACTCTGAAGCAACTTGAACGATACGACGGAAGCTTGTGCCGCGATGTAGTTTTTGTCCTAAAGATGAGTTATGAATATCTACTAAATGAAGCAAAGCTAATGTTCTTGCTATGTGCTGCCCTGGGTGAAGAGATTTTCTCTCAGCAACTGCTCAAACTTTGCTTGGGTTTGGGTTTATTTAAACACATTTACACAGTTGAAGAGGCAAGGTGGAGAATGGTCCGTTTGATCCATGATCTGAAAGGTCTGTATTTGCTGCAAGATGGCAAAACTAGCAACTCTGTTACCATGAACGTTGCAATTCGAAGTGCGGCACTGCAGATTGCATCTGAGGAATATAATATGTTTGTGGTGCCAGATGGTTATGAAGAGAGCATGTGGACTTCTGATGAAAATCCGATTCAGAATTTCACTGCACTGTTTCTGCTTGGGAATCATAGAGGTGTTCCTGAGAGGTTAGCGTGTCCTAAACTAAAGCTGTTCCATGTTTATGATGAAAGTTGTACTGTAGCAATCCCAAGCCATTTTTTTGAAGGGATGCATAGAGAACTGAAAGTCCTTAGTTTGATTAATATGAAGCTAGCATCACTCCCATCATCAATTCGTGTCCTAACAAGCATTCACACATTGTGCTTGGAGAAATGTGAGTTGGATGATATAGCATTGCTGGGAGAGctaattagtttaaaagttCTTAGTCTTGCAGGCAGCAACATAGAGCAATTGCCATGCCAAGTTAGAGGTTTAGTTAATCTTTGCTTCCTGGATTTAAGCAATTGttcaaaacttaaaaccaTTCCTCCCTTTGTCCTATCAAACCTGAAAAGACTTGAAGCACTGTTATTGCCTAACTGCTTTGGTCAGTGGCAGCACTATGAGAGATCCAAAGATGGAAGAACTAATGCTAGCCTTGGCGAGCTTACTCATTTGAATCATCTGGAAGTTCTGGACATACATATACCAGATATAAAGGTTCTTCCACAAGATTTGGCCTTTCATAAATTGCAAAGATATAACATTTCTATAGGCCAATTGCTGGGGCAGCATTCCggtaaatttgaaagaaacttGCAACTCAACCTTACTGGTGCAGATAGTACTGTGCATGGTTTGGTTAAGCCACTACTGGGGAAATCTGAAGAATTATGGTTACAGGAGTTAAAAGGTTTCAAGAGTATTCACGAGCTTGATCCCGAAGGATTTCTAACATTGAAGCATCTTCATATCCAAGATATGGCTGAGATGGAATATATAGCAAATTCTTCGTACTTGAACGCACCAATTGTTCATTCATTCAACAATTTGAGAGTTGTGAAGGTAGAACGTTGTAATAAGTTGgagtttcttttctcctcaTCCATGTGTAGAGGCCTTTCACGACTAACAGAAATGGAGATAAGTGAATGTTCCATGATGGGATCCATTCTAAGAGGGCACGAGGAAGATGCAGAACTCAGAAGCATCCAAGGATGCAATATGATGTTGTTCCGTGGATTGCGTTCCTTGACACTACAAAATCTGCCAAAACTCATTGGTTTTGTGACCATGGAGGTGGCCCAGAAACAGAGCCTCAATTCCTGTGCCCTGCTAGACAAGGTTGTATTCCCAAACTTAGAAAATTTGCAGCTGAGTGGACTGGGGGCCTTGACATATATATGGAAGGATCACGGTTTCGACCTTGAAATGCTAAAATCTCTATCCCTGTTTGAATGTAGCAATTTGAAGTACTTATTTTCACCAAATGCAGTTTCAGCTCTCTCTCATCTCCAAGAGCTAACGATAACTTCCTATAAATCCAACTTAGAAGTCCAAGTGATAGATTGTGATCCGTGGCACAAAGACCATGATCCACAGAACAGCATCgaatatctttttattccATCTTTTTG 2954 0.4025 MSVVVVRSAAGNLAELLGSVGRQIGYLIFWEKYVEDLREQLKKLLEARERDEVDITEARRNGKEIVNDVQYWLSSVDEIIEMAEKLFEDASHAKTKFCNSPFFHHQLRRKARKITNDASELQAQGVFACVSRLPISSFPDDLKEFEWRMPIFYGVMEAIEDPNIQVIGIGGMPGVGKTTLIKQIAKQAKTNRLFDRVVMAVVSAYPDVRRIQHQIADMLGLNLTEKSTTVRACRFYKRLNQEERLLIILDDVWYRLDLGQIGIPKGLKIVLTSRDQNVLHQMEAQKIFCVEPLLHNEAVSFFLKFSGITDDVESHSDPRYRELAVDIAHRCGGLPVLLEMVARGLKNKTYFQWKDTLKQLERYDGSLCRDVVFVLKMSYEYLLNEAKLMFLLCAALGEEIFSQQLLKLCLGLGLFKHIYTVEEARWRMVRLIHDLKGLYLLQDGKTSNSVTMNVAIRSAALQIASEEYNMFVVPDGYEESMWTSDENPIQNFTALFLLGNHRGVPERLACPKLKLFHVYDESCTVAIPSHFFEGMHRELKVLSLINMKLASLPSSIRVLTSIHTLCLEKCELDDIALLGELISLKVLSLAGSNIEQLPCQVRGLVNLCFLDLSNCSKLKTIPPFVLSNLKRLEALLLPNCFGQWQHYERSKDGRTNASLGELTHLNHLEVLDIHIPDIKVLPQDLAFHKLQRYNISIGQLLGQHSGKFERNLQLNLTGADSTVHGLVKPLLGKSEELWLQELKGFKSIHELDPEGFLTLKHLHIQDMAEMEYIANSSYLNAPIVHSFNNLRVVKVERCNKLEFLFSSSMCRGLSRLTEMEISECSMMGSILRGHEEDAELRSIQGCNMMLFRGLRSLTLQNLPKLIGFVTMEVAQKQSLNSCALLDKVVFPNLENLQLSGLGALTYIWKDHGFDLEMLKSLSLFECSNLKYLFSPNAVSALSHLQELTITSYKSNLEVQVIDCDPWHKDHDPQNSIEYLFIPSF 984
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02301 984 PANTHER PHOSPHATASE, PUTATIVE-RELATED 5 959 - -
Bva05g02301 984 Coils Coil 27 61 - -
Bva05g02301 984 Pfam NB-ARC domain 161 363 IPR002182 GO:0043531
Bva05g02301 984 PRINTS Disease resistance protein signature 166 181 - -
Bva05g02301 984 PRINTS Disease resistance protein signature 331 345 - -
Bva05g02301 984 PRINTS Disease resistance protein signature 602 618 - -
Bva05g02301 984 PRINTS Disease resistance protein signature 239 253 - -
Bva05g02301 984 PANTHER - 5 959 - -
Bva05g02301 984 SUPERFAMILY RNI-like 747 953 - -
Bva05g02301 984 SUPERFAMILY L domain-like 494 830 - -
Bva05g02301 984 Gene3D - 293 382 IPR042197 -
Bva05g02301 984 Coils Coil 104 124 - -
Bva05g02301 984 Gene3D Ribonuclease Inhibitor 499 959 IPR032675 -
Bva05g02301 984 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 393 IPR027417 -
Bva05g02301 984 SMART AAA_5 163 294 IPR003593 -
Bva05g02301 984 Gene3D - 132 289 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02301 Bva-Chr5 17605583 17610391 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02301 163 435 WRKY Transcription Factor Family AT5G45050 28.667 7.46e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02301 - - qsu:112041194 588.571