Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02290 ATGACTCCGGGTTTACTTTCTGGTGGTGGTGTTTCTTCTGGGATTTCTACAAATGAATCAAAAGTCTCAAATGTGACGGTAATGGGGCAAGATTACTTGACCATGTCTCCTTCTGAGGCATCCTCTTACAATGGTGAGGCTGAGCTTGAGCTGGGTTTGGGTCTGAGTCTCGGCGGCGCCGCCACTGCCGGCGGTGGTGGTGGGAAGGGGAAGGCTTCTGCATGGGGCGAGTGTGGGCGAATCTTGACGGCTAAAGACTTCCCTTCTGTTGTCTCTCGCGGTGCTGCTTCTCGTTTCTCAGACAGAGTTGGTGGCACTGGCACTTCTATTGGGACTAAGAGAGCTGCTGACTCTGTTTCTCAGGATGGTGGATCTCCAACTGCTGGCAGTCAAGTGGTTGGATGGCCACCTATAAGGACATATAGGATGAACAGCTTGATTAACCAAGCAAAGACTCAGAGGGCTGAAGAAGACAAATCAAGTGATGAGAGGGATAATCCTAAAGATGCTTCAATTGCCAAGTCCAACATGGCTGTCAAAGAGAAGGCAAATCTTGGGTTTGTGAAGGTGAACATGGATGGAATCCGAATCGGCCGGAAAGTGGACTTGAATTCTCATTCAAGCTATGAGACTTTAGCTCAAACACTGGAAGACATGTTTCTCAGGCCTGCAACTGCTGCTAATCAAACTGGTGGAGAGAAAGAACAGGCAACAAAAccatttaaacttttagatGGAACATCTGACTTTGTGCTCACATATGAAGATAAAGAGGGTGATTGGATGCTTGTGGGAGATGTTCCTTGGAGAATGTTCCTCAGCTCAGTGAGAAGACTCCGAATCATGAGAACATCAGAGGCTAATGGACTTGCTCCAAGATTCCAAGAGAAAAgccaaaagcaaagaaaaaaacccATTTA 920 0.4554 MTPGLLSGGGVSSGISTNESKVSNVTVMGQDYLTMSPSEASSYNGEAELELGLGLSLGGAATAGGGGGKGKASAWGECGRILTAKDFPSVVSRGAASRFSDRVGGTGTSIGTKRAADSVSQDGGSPTAGSQVVGWPPIRTYRMNSLINQAKTQRAEEDKSSDERDNPKDASIAKSNMAVKEKANLGFVKVNMDGIRIGRKVDLNSHSSYETLAQTLEDMFLRPATAANQTGGEKEQATKPFKLLDGTSDFVLTYEDKEGDWMLVGDVPWRMFLSSVRRLRIMRTSEANGLAPRFQEKSQKQRKKPI 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02290 306 Pfam AUX/IAA family 95 293 IPR033389 -
Bva05g02290 306 Gene3D - 180 296 - -
Bva05g02290 306 MobiDBLite consensus disorder prediction 101 135 - -
Bva05g02290 306 MobiDBLite consensus disorder prediction 102 128 - -
Bva05g02290 306 PANTHER AUXIN-RESPONSIVE PROTEIN 20 297 - -
Bva05g02290 306 ProSiteProfiles PB1 domain profile. 185 286 IPR000270 GO:0005515
Bva05g02290 306 SUPERFAMILY CAD & PB1 domains 186 282 - -
Bva05g02290 306 MobiDBLite consensus disorder prediction 152 170 - -
Bva05g02290 306 MobiDBLite consensus disorder prediction 149 175 - -
Bva05g02290 306 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 20 297 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02290 Bva-Chr5 17497372 17500260 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02290 189 293 B3 DNA Binding Superfamily AT1G59750 35.238 1.83e-12 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva05g02290 AUX_IAA 6e-64 CL0072