Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02252 ATGACAGAACCTAAGTCATCATGCAAGATCGTGAAGAAACGAGAGTCAGAAAATGGTCCTAAACTCAGCAATAAGCCTCTTAGGAAGCAACAAAGAAAGGGGGAAAACCCAACCCGGGTTCCTGACCATTCTTCCAATTTTGGACATTCAAACTCCTGGATCTCCAAAAGGATTGCTTGTAAATTAGAGGCCGCGGATGACGATGTCATTCTTCTAGATGCAGAGAAAGCTGGTTCAGCGAGACCGAATGGTTTTGGAGACTTCAAAACCTGCACTGATGGGCCAACTAGAGAAAGGCCAGCTGTTGATTCCCTTGCAGATAATTGTGGAAAAAGGGCAGCAAGCACAAATGTGCAGACACATGATAATGATAGCACTCTTGCAAATGGCCATCCCTCATTGCTGTCTGATGGTTCGCAATCCTCAGATAGAACCTTGGCGGATTGTGTGAAAACAATTCGTTGGCTAGAACGTGAGGGATACATCAAAAGGGAATTTAGGTTGAAATTTCTGACATGGTTTAGTATGAGATCGACAGAGCAAGAACGCAGGGTGGCGAATACCTTCATTCATACTTTGATGGATGATCCTACTAGTTTAGCTGAACAACTGGTTGACACATTTTCTGATGTTATCAAGCAAGAGGCCCAGAAATA 656 0.4375 MTEPKSSCKIVKKRESENGPKLSNKPLRKQQRKGENPTRVPDHSSNFGHSNSWISKRIACKLEAADDDVILLDAEKAGSARPNGFGDFKTCTDGPTRERPAVDSLADNCGKRAASTNVQTHDNDSTLANGHPSLLSDGSQSSDRTLADCVKTIRWLEREGYIKREFRLKFLTWFSMRSTEQERRVANTFIHTLMDDPTSLAEQLVDTFSDVIKQEAQK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02252 218 MobiDBLite consensus disorder prediction 1 48 - -
Bva05g02252 218 PANTHER VIN3-LIKE PROTEIN 1 4 68 - -
Bva05g02252 218 PANTHER VIN3-LIKE PROTEIN 1 73 215 - -
Bva05g02252 218 MobiDBLite consensus disorder prediction 114 139 - -
Bva05g02252 218 MobiDBLite consensus disorder prediction 1 39 - -
Bva05g02252 218 PANTHER VIN3-LIKE PROTEIN 2-RELATED 4 68 IPR044514 GO:0010048|GO:0040029
Bva05g02252 218 PANTHER VIN3-LIKE PROTEIN 2-RELATED 73 215 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02252 Bva-Chr5 17227754 17234230 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02252 139 212 PHD Gene Family AT3G24440 66.216 5.00e-27 106
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02252 - - gmx:100816128 186.037