Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02235 ATGGAAAAGAGAGTGGATATTGCTTTCTTCTGTTCGGCTTTCTTCCTGTTGTGGACTTTGGAGGAGGTTGCTGCTTTGCTTAGTCCTAAAGGTGTCAACTATGAAGTGCAAGCTCTAATGGACATTAAAGGGTCTCTGAAGGATCCACATGATTCCCTTGCTAATTGGGATGATAATGCTGTGAATCCTTGTAACTGGAATATGGTCACTTGTTCTCCAGATCATTTTGTGATTACCTTAGGAATCCCTAGCCAGAACTTATCTGGGACTCTTTCTCCAAGCATAGGCAACTTAACAAACCTGCAGTCTGTGCTCCTTCAagataacaatatatatggGTATATCCCATATGAGTTGGGGAAGCTCCAGAAGCTTGAAACTCTTGATCTTTCTGATAATATTTTCAGTGGCCAACTTCCGGATACTCTCTCACACATGAAGAGTCTCCACTACTTGGATATCTCTTATAATAACTTGAGTGGACCTCTACCCAAATTAAGTGCAAAAACATTCAATATTGTGGGCAATCCTCAGATATGTGCCCCTGGAACTGAGCAAAACTGCTTTAGAACAGCACCACTGTCTTCTACCTTGAATAATTCTCTAGATTTACAATCCTCTGGTAGACCAAAGAATCACAAAGTTGCCTTGGTATTTACTTCAAGCTTAAGCTGCATCTGCCTTCTAATTCTGGGCTTTGGATTCCTTCTACGGTGGAGACAAGGATACAACaagcaaattttctttgatgttAATGAACAACACCATGAAGAGATATGCCTTGGAAACCTCAAGAAGTTCCATTTCAGAGAACTTCAGGCTGCTACAAATAACTTCAGCAGCAAGAATTTGATTGGCAAAGGTGGCTATGGAAATGTCTACAAAGGTTATCTCTCGGATGGTTCAGTTATAGCAGTAAAAAGGCTTAAAGATGGTAATGCAATTGGGGGTGAGATCCAATTTCAGACTGAAGTTGAGATGATCAGCTTAGCTGTGCACCGGAATCTCCTTCGCCTCTCTGGATTCTGCATGACAACTACAGAGAGGCTCTTGGTTTATCCATATATGGCCAACGGTAGTGTTACTACCCGTCTTAAAGCCAAGCCTACTTTGGATTGGGGAACAAGGAAGAGGATAGCATTAGGAGCTGCAAGGGGCTTACTCTATCTGCATGAGCAATGTGACCCCAAGATCATCCACAGGGATGTCAAGGCTGCAAATATCTTGCTTGATGAATACTGTGAAGCTGTTGTAGGTGATTTTGGGTTGGCAAAGCTGTTGGATCACCGTGATTCGCACGTGACAACAGCAGTGAGAGGCACTGTAGGCCACATAGCCCCAGAGTATCTCTCAACAGGCCAGTCCTCTGAGAAAACAGATGTTTTCGGATTCGGAATCCTTCTCCTTGAATTGATTTCAGGCCAAAGAGCTCTTGAATTTGGGAAAGCAGCAAACCAGAAAGGAGCAGCTATGCTTGATTGGGTGAAGAAAATCCATCAAGAGAAGAAACTTGACTTGTTAGTAGACAAGGATGTGAAGAACAACTATGACAGAATAGAGCTTGAAGAAATTGTCCAAGTTGCCCTTTTGTGTACTCAATACCTGCCAAGCCACAGACCTAAGATGTCTGAAGTGGTTCGGATGCTCGAAGGAGACGGGCTAGCACAGAAATGGGAAGCCTCACAGAGAGCTGAATCAACTAGGAGCAAAGCAAATGAATTCTCCTCCTTGGAGCGCTACTCTGATCTTACTGATGACTCTTCATTGCTTGCTCAAGCAATGGAGCTTTCTGGACCAAGATG 1802 0.4267 MEKRVDIAFFCSAFFLLWTLEEVAALLSPKGVNYEVQALMDIKGSLKDPHDSLANWDDNAVNPCNWNMVTCSPDHFVITLGIPSQNLSGTLSPSIGNLTNLQSVLLQDNNIYGYIPYELGKLQKLETLDLSDNIFSGQLPDTLSHMKSLHYLDISYNNLSGPLPKLSAKTFNIVGNPQICAPGTEQNCFRTAPLSSTLNNSLDLQSSGRPKNHKVALVFTSSLSCICLLILGFGFLLRWRQGYNKQIFFDVNEQHHEEICLGNLKKFHFRELQAATNNFSSKNLIGKGGYGNVYKGYLSDGSVIAVKRLKDGNAIGGEIQFQTEVEMISLAVHRNLLRLSGFCMTTTERLLVYPYMANGSVTTRLKAKPTLDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAAMLDWVKKIHQEKKLDLLVDKDVKNNYDRIELEEIVQVALLCTQYLPSHRPKMSEVVRMLEGDGLAQKWEASQRAESTRSKANEFSSLERYSDLTDDSSLLAQAMELSGPR 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02235 600 SMART serkin_6 279 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02235 600 ProSitePatterns Protein kinases ATP-binding region signature. 285 307 IPR017441 GO:0005524
Bva05g02235 600 Pfam Leucine rich repeat 99 159 IPR001611 GO:0005515
Bva05g02235 600 ProSitePatterns Serine/Threonine protein kinases active-site signature. 398 410 IPR008271 GO:0004672|GO:0006468
Bva05g02235 600 Gene3D Transferase(Phosphotransferase) domain 1 356 569 - -
Bva05g02235 600 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 146 600 - -
Bva05g02235 600 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 4 153 - -
Bva05g02235 600 Pfam Leucine rich repeat N-terminal domain 33 72 IPR013210 -
Bva05g02235 600 ProSiteProfiles Protein kinase domain profile. 279 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02235 600 Pfam Protein kinase domain 280 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02235 600 Gene3D Phosphorylase Kinase; domain 1 248 355 - -
Bva05g02235 600 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 4 153 - -
Bva05g02235 600 PANTHER PROTEIN NSP-INTERACTING KINASE 2-LIKE 146 600 - -
Bva05g02235 600 SUPERFAMILY Protein kinase-like (PK-like) 258 550 IPR011009 -
Bva05g02235 600 Gene3D Ribonuclease Inhibitor 31 209 IPR032675 -
Bva05g02235 600 SUPERFAMILY L domain-like 34 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02235 Bva-Chr5 17049615 17053484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02235 1 600 Receptor kinase-like Gene Family AT5G16000 68.246 0.0 871
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva05g02235 Pkinase 7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02235 - - gmx:100790194 980.319