Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02220 ATGCCTTTCAAGAGGTTCATCGAGATCGGAAGGGTTGCTCTAATCAACTATGGAAAGGACTATGGTAAGCTCGTGGTCATCGTCGACGTCCTTGACCAGAACAGAGCTCTTGTTGATGCCCCTGATATGGTAAGGACCCAGATGAATTTCAAGAGACTCTCTCTTACCGACATTAAGATTGATATTAAGAGAGTCCCCAAGAAGAAGGATCTCCTAAATGCAATGGAGGCTGCTGATGTTAAGAAGAAGTGGGAAAGCAGCTCATGGGGAAGAAAATTGATTGTCCAAAAGAAGAGGGCATCCCTCAATGATTTTGACAGGTTCAAGCTAATGTTGGCCAAGATTAAGAAAGCTGCTGTTGTAAGGCAAGAGCTTGCTAAGCTGAAGAAGACCGCAGCTTA 401 0.4439 MPFKRFIEIGRVALINYGKDYGKLVVIVDVLDQNRALVDAPDMVRTQMNFKRLSLTDIKIDIKRVPKKKDLLNAMEAADVKKKWESSSWGRKLIVQKKRASLNDFDRFKLMLAKIKKAAVVRQELAKLKKTAA 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02220 133 PANTHER RIBOSOMAL PROTEIN L14, PUTATIVE-RELATED 1 133 - -
Bva05g02220 133 SUPERFAMILY Translation proteins SH3-like domain 5 93 IPR008991 -
Bva05g02220 133 Gene3D - 92 127 - -
Bva05g02220 133 PANTHER 60S RIBOSOMAL PROTEIN L14 1 133 IPR039660 GO:0003723|GO:0003735
Bva05g02220 133 Pfam Ribosomal protein L14 45 117 IPR002784 GO:0003735|GO:0005840|GO:0006412
Bva05g02220 133 Gene3D - 1 84 IPR014722 -
Bva05g02220 133 CDD KOW_RPL14 7 79 IPR041985 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02220 Bva-Chr5 16945751 16947540 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02220 1 130 Cytoplasmic Ribosomal Protein Gene Family AT4G27090 83.846 5.21e-76 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02220 K02875 - sly:101252219 237.269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02220 05 16945751 16947540 Bva05g02220 05 16945751 16947540 ECH