Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02219 ATGGGTCTGAGGGATCTTCATCTCAAATTCAAGGCATTGAGGCTGAGGCGTTTTCTCTTAGGAGGCAGAGGCAAGAGAAGGGAGAATGGGTCAAAAAGGAAGCCTTCATGGATGATGCCAATATCACATGGCTCCCATGTTGTGGAGCATAATCGAATATTCAGTTCAGATGATTCAGGCTGTGATTCAATTGTGGTGCAGAGAGAGGAAATAGAAGGAGCAGAAGTCTGGTATTTTGGAATCTTTGATGCTCTCATTGGAGATGCGGTCACCAACTTCATGCAATCCCATTTCTTTGACAAGAAACTCAAAGAGTCCCATATAAGGAGAAGGGGCCAAGAGGCATTGAAGAGAGCATACCTTAGTGCAAGATCAAAGATCAGAGAGGAACACAAACCAGAAGAAACACGCAGAATGGGTTCAGCTTCTGCAATTGTCATAAATGGAGAAAAGCTTGTAATAGCTAATATGGGAGATTACAGAGCTGTTGTGTGCAGAGATGGTGTTGCTCATAACAAAATCACCAAACACCAACAATCACCCAAAAGACATTGGTGTCGCAGACTCTTTACAGCAGGTACAAGGCGTTCTAAAGGGTCAGAACTTGTGGTGGGAGCTGAAAGGATCAACTCTGATACTGAATTTTTGATCTTAGCAAGCAATGGCATATGGGAGGTGATGAAGAATCAAGAGGCTGTGAATCTGATAAGGCACATAGAGGATCCACAAGAAGCTGCTGAGTGCTTAACAAAGGAAGCTTTAATTAGGATGAGCAAAAGCAGCATCTCATGCTTAATCATTCGCTTTGACTA 812 0.431 MGLRDLHLKFKALRLRRFLLGGRGKRRENGSKRKPSWMMPISHGSHVVEHNRIFSSDDSGCDSIVVQREEIEGAEVWYFGIFDALIGDAVTNFMQSHFFDKKLKESHIRRRGQEALKRAYLSARSKIREEHKPEETRRMGSASAIVINGEKLVIANMGDYRAVVCRDGVAHNKITKHQQSPKRHWCRRLFTAGTRRSKGSELVVGAERINSDTEFLILASNGIWEVMKNQEAVNLIRHIEDPQEAAECLTKEALIRMSKSSISCLIIRFD 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02219 270 Pfam Protein phosphatase 2C 76 194 IPR001932 -
Bva05g02219 270 Pfam Protein phosphatase 2C 208 260 IPR001932 -
Bva05g02219 270 SMART PP2C_4 48 267 IPR001932 -
Bva05g02219 270 PANTHER ALPHABET, ISOFORM E-RELATED 6 269 - -
Bva05g02219 270 SUPERFAMILY PP2C-like 58 270 IPR036457 -
Bva05g02219 270 Gene3D - 56 270 IPR036457 -
Bva05g02219 270 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 6 269 - -
Bva05g02219 270 ProSiteProfiles PPM-type phosphatase domain profile. 45 269 IPR001932 -
Bva05g02219 270 CDD PP2Cc 51 269 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02219 Bva-Chr5 16939422 16942585 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02219 1 269 PP2C-type Phosphatase Gene Family AT3G23360 46.763 1.23e-78 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02219 K19704 - gmx:100794054 364.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02219 05 16939422 16942585 Bva05g02219 05 16939422 16942585 ECH