Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02217 ATGGCAAACAACCATAGAAACTTCATACAATATCTCCCTCATAACAACACCTTCCCAATCGAGTGCCGATTTTGCAACCAAGTTATCTCAACCAATGCTGCTCTCATTAGCCATATGGAATTTCATATACAGCAACAAGAGATGGCGTTAGGAATTCAAGATTCACAACATCAGATTACTTACCAAAGAGAACCAATTGCGAATAATTTTTCTAGCATTGTTCCTGCATCGAGGCCGATCGTGGCACCTCCAAAATCTCCAGAGATGTTTCCTGCTAGAACAAATTCTTTTCTGAGGGccactcaatttttttctctaaccCTAATGCAGGATGTTCAACCAGCTCATGATCAGATTTCTTCCTTGGTACAAAGCACACTAATTCCACAGGTTAGCCTGAGAGAGATGGAGGTATATCCAACTGATGGCACTAAACCATTAATCCAAATGTTGGAGCATCCCATAATGAATATTGAATTCATTGATTTGGTTGAGGATGACCATGAATTGGATTTGAAGTTGTA 524 0.3817 MANNHRNFIQYLPHNNTFPIECRFCNQVISTNAALISHMEFHIQQQEMALGIQDSQHQITYQREPIANNFSSIVPASRPIVAPPKSPEMFPARTNSFLRATQFFSLTLMQDVQPAHDQISSLVQSTLIPQVSLREMEVYPTDGTKPLIQMLEHPIMNIEFIDLVEDDHELDLKL 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02217 174 ProSitePatterns Zinc finger C2H2 type domain signature. 22 42 IPR013087 -
Bva05g02217 174 ProSiteProfiles Zinc finger C2H2 type domain profile. 20 47 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02217 Bva-Chr5 16920852 16921376 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva05g02217 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02217 - K24255 lja:Lj2g3v1643270.1 58.5362