Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02213 ATGGATCACGTTATTGGAGGAAAATTTAAGCTCGGGCGGAAGATTGGGAGTGGATCCTTTGGCGAGCTTTATTTAGGCGTTAATGTGCAAAGTGGAGAGGAAGTAGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAGCTTCACTATGAGTCCAAATTATATATGCTTCTTCAAGGAGGAACTGGTATACCCCATTTGAAATGGTTTGGAGTGGAGGGTGAATACAACGTCATGGTTATTGATCTTCTTGGACCAAGTCTAGAAGACTTGTTTAACTACTGCAATCGAAAATTCACTCTGAAAACAGTCCTGATGCTTGCAGATCAGCTAATAAATAGAGTTGAGTACATGCACTCCCGGGGATTTCTTCACCGTGATATAAAGCCTGATAACTTTTTAATGGGTTTGGGCCGCAAGGCAAACCAgGTCTACATAATTGATTATGGCCTTGCAAAAAAGTATCGGGATCTTCAAACACACAAGCACATACCATACAGGGAAAACAAGAATCTTACTGGAACAGCTCGGTATGCAAGTGTTAACACTCACCTTGGAGTTGAACAAAGCAGAAGAGACGATCTAGAATCACTTGGTTATGTGCTTATGTATTTTCTGAGAGGAAGTCTCCCTTGGCAAGGCTTGAAAGCTGGCACCAAAAAGCAGAAATATGACAAGataagtgaaaagaaaatgcttaCTCCTATTGAGGTCCTATGCAAATCATATCCATCAGAATTTATATCGTACTTCCACTATTGTCGATCATTGCGGTTTGAAGACAAACCTGATTATTCATACCTGAAGAGACTCTTCCGGGACCTATTCATTAGAGAAGGTTATCAGTTTGACTATGTATTTGATTGGACTATCTTGAAATATCCACAAATTGGGTCCAGTTCTAGATCACGACCCAGTGGAAAAGCTGTTGTAAACCCAGGAGCATCTGCAGAACGACCTTCAGtTGGACAAGAAATTCGGGATAGATTCTCGGGCGCGGTCGAGGCATTTGCTAGAAAGAATGGTTCTGGGCTTGGTCTGCATGGTGACCACTCTAGGCACAGGGCTTCGGATGATGTGCCTTCTTCCAAAGATGTGCAAGCTGAGTCTGAGAGGGCCCGTAGTTCATCTCGCAATGGCAGTGCTTCAAAAAGACCAGTCATGTCAAGCAGCCGACCAAGCTCCTCTGGTGAGCCCAGCGAAAACCGCAGTAGATTGCTCTCGAGCAGTAGCCGTCTGTCCACAACTCAGAGGATTCAACCTGGGTTAGAGTCCAAAACATCATCTTTTTCCCGCACCACCATGAGAACCGGCCGCGATGACACCCTCAGGAGCTTTGAGCTCCTGTCAATTGGAAAAGgcaaaaggaaatg 1376 0.4368 MDHVIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLHYESKLYMLLQGGTGIPHLKWFGVEGEYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQVYIIDYGLAKKYRDLQTHKHIPYRENKNLTGTARYASVNTHLGVEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYDKISEKKMLTPIEVLCKSYPSEFISYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRSRPSGKAVVNPGASAERPSVGQEIRDRFSGAVEAFARKNGSGLGLHGDHSRHRASDDVPSSKDVQAESERARSSSRNGSASKRPVMSSSRPSSSGEPSENRSRLLSSSSRLSTTQRIQPGLESKTSSFSRTTMRTGRDDTLRSFELLSIGKGKRK 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02213 458 PANTHER CASEIN KINASE-RELATED 1 442 - -
Bva05g02213 458 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva05g02213 458 MobiDBLite consensus disorder prediction 374 437 - -
Bva05g02213 458 MobiDBLite consensus disorder prediction 347 373 - -
Bva05g02213 458 MobiDBLite consensus disorder prediction 299 326 - -
Bva05g02213 458 Pfam Protein kinase domain 10 228 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02213 458 Gene3D Transferase(Phosphotransferase) domain 1 1 326 - -
Bva05g02213 458 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Bva05g02213 458 SMART serkin_6 9 431 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02213 458 MobiDBLite consensus disorder prediction 342 443 - -
Bva05g02213 458 PANTHER CASEIN KINASE I-LIKE 1 442 - -
Bva05g02213 458 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva05g02213 458 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02213 458 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02213 Bva-Chr5 16887649 16893453 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02213 8 213 MAP Kinase Kinase Kinase AT3G06030 25.926 1.58e-14 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva05g02213 Pkinase 3.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02213 K08960 - qsu:112030604 812.372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02213 05 16887649 16893453 Bva05g02213 05 16887649 16893453 ECH