Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02207 ATGAATCCCTTAGAAGATTGGCCCGATTCCTTGAAAGATTGGGATTTTCTCGATGAAATTTTCGTCGATGACAAACATCCGCCCCCAGATTTTGCTTGGCACAATCAGATTCCCAGTGTAAGCGCGGAGATTGACTTTTCTGCAGGTAGTGTAGCTTCACAAGAGAGCACCCGGAAGAGGGGACGAACTACTAATTCATGCAGCAAGCCAGGAACAAAAGCATATCGTGAGAAAGAGCGGAGGGAGAAGCTCAATGACAGGTTTGCTGACTTGAGCTCTGTTTTGGAACCTGGGAGATCTGTAAAATCTGATAAACCAGCCATACTTGATGATGCTGTTAGAGTCTTGAACCAACTTAAAGCTGAAGCTCAGGAACtcaaagaaacaaatgaaaagttgttagaggaaataaaatgtttgaagGCAGAGAAAAATGAGCTTCGTGAAGAGAAGCTTGTTTTGAAAGCAGATAAAGAGAAGATTGAGAGGCAGTTAAAAGCTATGCCGCCCCATGCAACTGCATATCCAGCAGGGGTCAACAAGATGACTGTTTTTCCCAGTTATGGTTTTATCCCGTGGCATTATATGCCTGTAGCGGCTCGCGATACATCGCGTGATCATGAACTCAGGCCTCCTGCCGCATA 644 0.427 MNPLEDWPDSLKDWDFLDEIFVDDKHPPPDFAWHNQIPSVSAEIDFSAGSVASQESTRKRGRTTNSCSKPGTKAYREKERREKLNDRFADLSSVLEPGRSVKSDKPAILDDAVRVLNQLKAEAQELKETNEKLLEEIKCLKAEKNELREEKLVLKADKEKIERQLKAMPPHATAYPAGVNKMTVFPSYGFIPWHYMPVAARDTSRDHELRPPAA 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02207 214 SMART finulus 74 125 IPR011598 GO:0046983
Bva05g02207 214 MobiDBLite consensus disorder prediction 48 81 - -
Bva05g02207 214 PANTHER TRANSCRIPTION FACTOR BHLH104 12 214 - -
Bva05g02207 214 Coils Coil 109 164 - -
Bva05g02207 214 PANTHER BHLH TRANSCRIPTION FACTOR 12 214 IPR044818 GO:0003700|GO:0006355|GO:0046983|GO:0055072
Bva05g02207 214 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 62 134 IPR036638 GO:0046983
Bva05g02207 214 Pfam Helix-loop-helix DNA-binding domain 72 119 IPR011598 GO:0046983
Bva05g02207 214 MobiDBLite consensus disorder prediction 48 71 - -
Bva05g02207 214 CDD bHLH_AtILR3_like 73 148 - -
Bva05g02207 214 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 68 119 IPR011598 GO:0046983
Bva05g02207 214 Gene3D - 72 152 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02207 Bva-Chr5 16820424 16822780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02207 47 214 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G14410 64.835 1.66e-71 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva05g02207 HLH 6.4e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02207 - - gmx:100787583 271.937