Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02205 ATGGATGAAGAAGGCTCAAGGGGgaaaaccaaggaagagggaGGAGAGGTACGGTACCGCGGCGTCCGAAGGCGGCCGTGGCGGAAATTTGCGGCGGAGATTCGCGATTCCACGAGGCAGGGCCAGAGGGTGTGGCTCGGAACCTTCAACACGGCGGAGGAAGCAGCCAGGGCCTATGACAGAGCTGCTTATGCTATGAGGGGCTCTTTTGCTATCCTCAATTTCCCAGATGAATACCCTGCTGGtactgctgctgctgctgcttcttcttcttcgagGCCTGGGAATGTGGAGAATCCAAAACAAGTGTTCGAGATTGAGTACTTGGATGACAATTTGTTGGAGGAGCTTCTTGACTAcgaggagaaaaagaagaagggaaaGTA 386 0.4404 MDEEGSRGKTKEEGGEVRYRGVRRRPWRKFAAEIRDSTRQGQRVWLGTFNTAEEAARAYDRAAYAMRGSFAILNFPDEYPAGTAAAAASSSSRPGNVENPKQVFEIEYLDDNLLEELLDYEEKKKKGK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02205 128 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 ProSiteProfiles AP2/ERF domain profile. 18 76 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF096 3 126 - -
Bva05g02205 128 SMART rav1_2 18 82 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 CDD AP2 18 77 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 SUPERFAMILY DNA-binding domain 18 78 IPR016177 GO:0003677
Bva05g02205 128 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Bva05g02205 128 PANTHER DNA-BINDING DOMAIN 3 126 IPR044808 GO:0003700|GO:0009873
Bva05g02205 128 Gene3D AP2/ERF domain 17 77 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02205 Bva-Chr5 16804957 16805343 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02205 16 125 AP2-EREBP Transcription Factor Family AT3G23230 58.537 6.27e-41 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva05g02205 AP2 4e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02205 - - gmx:100775830 138.658