Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02196 ATGGAACGTGGGGTTCTTGATGGTATAATTAACAGGCTGCTTGAAGTCAGGGGAAGACCTGGGAAGCTGGTACAGCTTTCTGAAGCTGAAATCAGGCAGCTTTGTGTTGTTTCCAAAGATATTTTCTTGAGGCAGCCTAATCTCTTGGAACTTGAAGCACCCATTAAGATCTGTGGAGACATTCATGGTCAATATTCTGACCTTCTGAGACTTTTTGAATATGGTGGATTGCCTCCTCGCTCCAATTACTTATTCTTAGGGGATTATGTGGATCGCGGAAAGCAGAGTTTGGAGACAATATGTCTTCTTCTTGCATACAAAATAAAGTATCctgaaaatttctttcttctgagAGGCAACCATGAATGTGCTTCTATAAATCGTATATATGGATTCTATGATGAATGTAAACGGAGATTCAATGTCAGGCTCTGGAAGCTATTCACGGACTGCTTCAACTGCATGCCAGTGGCAGCTCTTATTGATGAAAAGATACTTTGTATGCATGGTGGACTCTCTCCTGATTTGATCAATCTAAATCAGATAAGGAGTCTACCACGTCCCACTGAAGTCCCCGAAACTGGTCTACTTTGTGACCTTCTCTGGTCTGATCCTAGTAGAGACATCACTGGTTGGGGAGTCAACGAGCGAGGAGTTTCCTATACCTTTGGTGCTGACAGGGTTTCAGAAATTCTTCGAAAATTTGATCTTGACTTAATCTGCAGAGCCCACCAGGTTGTGGAAGATGGATATGAATTCTTTGCTAATAGACGACTAGTGACTATATTTTCAGCACCCAACTACTGTGGAGAGTTTGACAATGCTGGTGCAATGATGACTGTTGATGAGACCCTCATGTgttcttttcaaatattaaagcCACTGGATAAAAAGCCAAAATTTAGTTTTGGGAGCCTATTGCATTA 926 0.4028 MERGVLDGIINRLLEVRGRPGKLVQLSEAEIRQLCVVSKDIFLRQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPRSNYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRLWKLFTDCFNCMPVAALIDEKILCMHGGLSPDLINLNQIRSLPRPTEVPETGLLCDLLWSDPSRDITGWGVNERGVSYTFGADRVSEILRKFDLDLICRAHQVVEDGYEFFANRRLVTIFSAPNYCGEFDNAGAMMTVDETLMCSFQILKPLDKKPKFSFGSLLH 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02196 308 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 305 - -
Bva05g02196 308 Pfam Calcineurin-like phosphoesterase 54 246 IPR004843 GO:0016787
Bva05g02196 308 SUPERFAMILY Metallo-dependent phosphatases 18 298 IPR029052 -
Bva05g02196 308 PANTHER SERINE/THREONINE PROTEIN PHOSPHATASE 1 305 - -
Bva05g02196 308 ProSitePatterns Serine/threonine specific protein phosphatases signature. 117 122 IPR006186 GO:0016787
Bva05g02196 308 Gene3D - 2 305 IPR029052 -
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 83 110 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 179 206 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 150 176 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 54 81 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 236 256 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 258 274 IPR006186 GO:0016787
Bva05g02196 308 PRINTS Serine/threonine phosphatase family signature 116 140 IPR006186 GO:0016787
Bva05g02196 308 CDD MPP_PP1_PPKL 5 294 - -
Bva05g02196 308 Pfam Serine-threonine protein phosphatase N-terminal domain 6 52 IPR031675 -
Bva05g02196 308 SMART pp2a_7 26 296 IPR006186 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02196 Bva-Chr5 16648387 16652370 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02196 20 242 Calmodulin-binding Proteins AT5G63870 28.679 1.35e-26 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02196 K06269 - cit:102610648 581.252