Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02194 ATGGCTAATGATAACTTGCAGGTGTTGAATGCACTTGATGTTGCCAAAACACAATGGTACCATTTCACAGCAATTGTGATTGCTGGCATGGGTTTTTTCACCGATGCTTATGACCTTTTTTGCATATCTCTTGTGACCAAATTGCTTGGCCGGATATACTACTATGAACCAGGCTCTTCTAAGCCAGGTGTTCTACCTAATAATGTTTCTGCAGCAATCAATGGTGTTGCTTTCTGCGGCACCCTTGTTGGCCAGCTCTTCTTTGGCTGGCTTGGTGACAAAATGGGTAGAAAACGTGTCTATGGAATGACTCTTATGCTCATGGTGATTTGTTCAGTTGCTTCTGGCCTCTCTTTCGGGAAAGAACCAAAAGCTGTTATGGCCGCCCTTTGCTTCTTTCGTTTTTGGCTTGGATTTGGCATTGGTGGAGACTACCCTCTCTCAGCCACCATCATGTCTGAGTATGCTAACAAGAAAACTCGTGGAGCTTTCATTGCTGCAGTGTTTGCCATGCAGGGTTTTGGGATTTTAGCTGGTGGGACTATTGCTAGCGTAGTTTCTTCAGCTTTCAAGGCTAAGTACCCAGCCCCAGCTTTTCAAATCGACCCAATTGGTTCCACGGTGCCAGAAGCTGACTACGTTTGGCGTATAATTCTCATGTTTGGTGCCCTCCCAGCTTTTCTCACATACTATTGGCGTATGAAAATGCCTGAAACAGCTAGATACACAGCCTTGGTTGCTAAGAATGCAAAGCAAGCAGCTTCAGATATGTCAAAAGTGTTACAGGTTGAGATAGAAGCTGAACAAGAAAAAGTTGAGGAGTTGGAAAGCAAAGCAGGGAACGATTTTGGGCTATTCTCTAAACAGTTTCTTCGCCGCCATGGCCTTCACTTACTTGGAACTACCTCCACTTGGTTCCTCCTAGACATTGCCTATTACAGCCAAAACCTATTCCAAAAGGACATTTTCAGTGGCATTGGCTGGATTCCTGAGGCTAAAACCATGAGTGCCATGGAAGAGGTTTTTCGAATTGCACGAGCACAGACTCTGATTGCTCTTTGCAGCACTGTCCCTGGCTATTGGTTCACAGTGGCACTCATTGACAAGATTGGAAGGTTTGTAATCCAATTGATGGGCTTCTTCTTCATGACAGTATTCATGTTTGCCTTGGCCATTCCCTACCACCATTGGACTCTGAAGGACAACCGAATTGGCTTTGTTGTTATGTATTCATTCACCTTCTTCTTCGCAAATTTCGGTCCCAATGCCACTACATTCATTGTCCCTGCAGAGATTTTCCCAGCAAGGCTAAGGTCCACGTGCCATGGCATTTCTGCTGCATCAGGCAAACTAGGGGCAATAGTTGGCTCTTTTGGCTTCCTCTATGCTCAAAAGGGCATTGGAATCAGAAACACTCTTATTACTTTGGGAGTGATTAACTTTTTTGGGATGCTCTTCACATTATTGGTGCCTGAATCTAAAGGAAAGTCGTTGGAGGAGATGTCTGGGGAGGCTGAGCAAGAGATTGTTACAACTAGAGATGGTGTTGACGCTAGAACTATTCCTGTcta 1571 0.4475 MANDNLQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYYEPGSSKPGVLPNNVSAAINGVAFCGTLVGQLFFGWLGDKMGRKRVYGMTLMLMVICSVASGLSFGKEPKAVMAALCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILAGGTIASVVSSAFKAKYPAPAFQIDPIGSTVPEADYVWRIILMFGALPAFLTYYWRMKMPETARYTALVAKNAKQAASDMSKVLQVEIEAEQEKVEELESKAGNDFGLFSKQFLRRHGLHLLGTTSTWFLLDIAYYSQNLFQKDIFSGIGWIPEAKTMSAMEEVFRIARAQTLIALCSTVPGYWFTVALIDKIGRFVIQLMGFFFMTVFMFALAIPYHHWTLKDNRIGFVVMYSFTFFFANFGPNATTFIVPAEIFPARLRSTCHGISAASGKLGAIVGSFGFLYAQKGIGIRNTLITLGVINFFGMLFTLLVPESKGKSLEEMSGEAEQEIVTTRDGVDARTIPV 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02194 523 Coils Coil 523 523 - -
Bva05g02194 523 CDD MFS_PhT 25 494 - -
Bva05g02194 523 Pfam Sugar (and other) transporter 25 502 IPR005828 GO:0016021|GO:0022857|GO:0055085
Bva05g02194 523 Coils Coil 258 278 - -
Bva05g02194 523 Gene3D MFS general substrate transporter like domains 272 518 IPR036259 -
Bva05g02194 523 Gene3D MFS general substrate transporter like domains 20 267 IPR036259 -
Bva05g02194 523 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 4 512 - -
Bva05g02194 523 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 4 512 - -
Bva05g02194 523 SUPERFAMILY MFS general substrate transporter 11 502 IPR036259 -
Bva05g02194 523 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 495 IPR020846 GO:0022857
Bva05g02194 523 TIGRFAM 2A0109: phosphate:H+ symporter 11 504 IPR004738 GO:0005315|GO:0006817|GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02194 Bva-Chr5 16626395 16629359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02194 1 523 Inorganic Solute Cotransporters AT2G38940 77.612 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02194 K08176 - gmx:100792711 914.835
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02194 05 16626395 16629359 Bva05g02194 05 16626395 16629359 ECH