Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02193 ATGACTGAACTTCTCAAACAAGACTACGTCGTTTTCTCAGAGCTCGGCCGCGGACGATTCGGCGTCGTTTCCCGCTGTGTCGCCGTGGACTCCGGTGAGTCCTTCGCCGTCAAATCCATTGATAAGCGGGTTATTTCCGCCGGAGACTCACTGGACACCCAATGCCTTCTCTCTGAGCCCAAGATCCTCCACCTTCTGTCTCGTCACCCTCACATCACCGCCATCCACGGCGTCTACGAGGACGAAACACACCTCCATATGGTCATTGATCTCTGCAGTTCTTCGGATCTCCATACACGGATTATCTCGCGGGTTATACCCGAACCCGAGGCTGCGTCTCTTATGCGGCAGCTAATGCAAGCCGTCGCGCACTGCCACCGGCTCGGCGTAGCTCACCGGGACATAAAACCGGATAACATACTCTTCGACCAGGAGAACCAGCTCAAGCTTGCTGACTTCGGGTCAGCTGAGATGATTAAGGAGGATGAACTGATGAGTGGACTCGTGGGGACTCCGTATTACGTGGCCCCGGAGGTTCTCGCCGGCGGAGAGTATAACGAGAAAGTTGACGTGTGGAGTTCTGGTGTCGTTTTATATGTAATGCTAGCTGGGTTTCCACCGTTCTATGGAGATTCTGCGGTGGAGATTTTTCAGGCAGTGCTAAGAGGGAACTTGAGGTTCCCGAGCAGGGCCTTTCACGGCGTCTCGTCGGCGGCAAAGGATCTGCTCCGGAGAATGCTGTCCAGAGACGTTTCTAGAAGGTTCTCAGCAGAGCAAGTTCTGAGGCATCCATGGTTTACCATTGCAAGTGAGAGCATGGCAACGGGGTG 830 0.5446 MTELLKQDYVVFSELGRGRFGVVSRCVAVDSGESFAVKSIDKRVISAGDSLDTQCLLSEPKILHLLSRHPHITAIHGVYEDETHLHMVIDLCSSSDLHTRIISRVIPEPEAASLMRQLMQAVAHCHRLGVAHRDIKPDNILFDQENQLKLADFGSAEMIKEDELMSGLVGTPYYVAPEVLAGGEYNEKVDVWSSGVVLYVMLAGFPPFYGDSAVEIFQAVLRGNLRFPSRAFHGVSSAAKDLLRRMLSRDVSRRFSAEQVLRHPWFTIASESMATG 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02193 276 SUPERFAMILY Protein kinase-like (PK-like) 4 267 IPR011009 -
Bva05g02193 276 Gene3D Phosphorylase Kinase; domain 1 11 97 - -
Bva05g02193 276 PANTHER PHOSPHOENOLPYRUVATE CARBOXYLASE KINASE 1 4 272 - -
Bva05g02193 276 PIRSF ILK 2 263 - -
Bva05g02193 276 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bva05g02193 276 Gene3D Transferase(Phosphotransferase) domain 1 98 275 - -
Bva05g02193 276 Pfam Protein kinase domain 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02193 276 PANTHER SERINE/THREONINE-PROTEIN KINASE 4 272 - -
Bva05g02193 276 CDD STKc_CAMK 8 265 - -
Bva05g02193 276 ProSiteProfiles Protein kinase domain profile. 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02193 276 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva05g02193 276 SMART serkin_6 9 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02193 Bva-Chr5 16619899 16621372 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02193 3 272 EF-hand Containing Proteins AT1G50700 41.091 2.39e-71 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Bva05g02193 Pkinase 9.4e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02193 - K08794 jre:108991068 415.231