Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02169 ATGTTTGCTTCTTCTATGTTTTGCCCTTCTGGGTTTGACCTTTTTGATCTCTTGAATTCTGAGACAACTTTGATTTCTTTCCTTGATTCAGCAGCTATGGCTAACCCTTGGTGGACAGGTCAGGTTGGGTTGCCGGGTGTGGACCCGGTGGCGAATTCTCCTGGCCTTAACAAACGCCACACGGAGCTCTCCATCAATGAGAGCAGCGGCAGGAGTGGTGGCagagatgatgatgaagatagGGATACTGTAGACGAGCCCAAAGAGGGTGCAGTTGAGGTTGGAACCCGCAGACCTAGAGGAAGACCACCCGGATCCAAAAACAAGCCAAAACCACCCATTTTTCTGACCCGGGACAGCCCGAATGCCCTGAGAAGCCATGTGATGGAGGTAGCTGGTGGAGCTGATGTTGCTGAAAGTGTTGCCCAATTCGCAAGAAGGCGTCAACGTGGAGTCTGTGTGCTTAGTGGCAGTGGCTCTGTGGCCAACGTTACTCTCAGACAACCTGCGGCTCCTGGTGCGGTGGTGGCCCTTCATGGGAGATTTGAGATTCTGTCCCTAACTGGAACCTTCCTTCCAGGACCTTCCCCTCCCGGTTCTACGGGACTCACGGTGTACCTCGCAGGAGGACAAGGGCAGGTCGTGGGAGGAAGTGTGGTGGGCTCATTACTTGCAGTAGGACCAGTTATGGTCATTGCTGCAACTTTTGCTAATGCAACATATGAGAGGCTGCCACTGGATGATGAGGACGAAGCTGGAAGCTCTGCCCAAGGAGCCGCCAGAGGGTCCCCTCCGGCGATCGGAAGTAGTGGGGGCCAGTTGCAGCCAGGGCTTCCAGATCCATCATCTCTGCCTTTATACAATCTGCCAACAAATCTGATGCCCAACGGCGGGCAGGTGGGGCATGAAGCTTTTGCTTGGGCTCATGGGCGGCCAGCTTACTA 944 0.535 MFASSMFCPSGFDLFDLLNSETTLISFLDSAAMANPWWTGQVGLPGVDPVANSPGLNKRHTELSINESSGRSGGRDDDEDRDTVDEPKEGAVEVGTRRPRGRPPGSKNKPKPPIFLTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGTFLPGPSPPGSTGLTVYLAGGQGQVVGGSVVGSLLAVGPVMVIAATFANATYERLPLDDEDEAGSSAQGAARGSPPAIGSSGGQLQPGLPDPSSLPLYNLPTNLMPNGGQVGHEAFAWAHGRPAY 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02169 314 MobiDBLite consensus disorder prediction 49 121 - -
Bva05g02169 314 CDD DUF296 125 208 IPR005175 -
Bva05g02169 314 Pfam Plants and Prokaryotes Conserved (PCC) domain 125 237 IPR005175 -
Bva05g02169 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 20-LIKE 32 314 - -
Bva05g02169 314 SUPERFAMILY AF0104/ALDC/Ptd012-like 121 250 - -
Bva05g02169 314 ProSiteProfiles PPC domain profile profile. 121 258 IPR005175 -
Bva05g02169 314 Gene3D - 124 252 - -
Bva05g02169 314 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 32 314 IPR014476 GO:0003680
Bva05g02169 314 MobiDBLite consensus disorder prediction 249 290 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02169 Bva-Chr5 16466031 16467090 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02169 33 314 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 64.583 4.31e-107 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02169 - - mesc:110601522 393.275
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02169 05 16466031 16467090 Bva05g02169 05 16466031 16467090 ECH