Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02167 ATGGAGAGAAACGGGTTGAGCACCAGCTTGAAAGACCATAGTAGCACTGTCATCAACAGTCCTATAAAAGAGTCCAGCTATGGCAACTACAGCAACAAGAGCAAAATGGTTAAAGAATCTTGGGACTGTAACTCTCAGAGCAATGAAGAGGACTACCTGAGTGGATTCTCATGGCCTCCAAGGTCATACACTTGTAGCTTCTGCAAAAGAGAATTTAGATCTGCTCAGGCGCTTGGTGGCCATATGAATGTCCACAGAAGGGATAGAGCCAGGCTGAGACAGTCATCTCCAAATGAAGGTCAAGCTCCTATGCTTAACCTAAACGTTAACCCTACCTCTAATACTAACTTCTCAACCTCATCTATGTCCTTACTATCATCACCATCTTCCACCACTAGGCTCAAACCTTTCGCTTTCGCATTACCCTCCTTGGTATCTCATACACTTTCGTCTTCATCTTCTCCATCTTCTGCCTCTCCTGAATTGAAAAAACTTGTGGATGGTATCCTATTGAACCCAAAGGCCTCGGAgtcaataaaattgaagaatgcagAACATTTAACTGGGTTTAGAGAATATGATGCTTTTGCTCAAGAAAATGGATGCAAAATCTTGGAAAAGGGTGAGATCATTACATTGGACTTGGAGATTGGTTTGTTTAGTGATTCTAAGGAGGATTTAGATCTGGAGCTTCGATTGGGTACTTATTCTTA 713 0.4109 MERNGLSTSLKDHSSTVINSPIKESSYGNYSNKSKMVKESWDCNSQSNEEDYLSGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRQSSPNEGQAPMLNLNVNPTSNTNFSTSSMSLLSSPSSTTRLKPFAFALPSLVSHTLSSSSSPSSASPELKKLVDGILLNPKASESIKLKNAEHLTGFREYDAFAQENGCKILEKGEIITLDLEIGLFSDSKEDLDLELRLGTYS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02167 237 Gene3D Classic Zinc Finger 57 115 - -
Bva05g02167 237 ProSiteProfiles Zinc finger C2H2 type domain profile. 63 90 IPR013087 -
Bva05g02167 237 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY PROTEIN 25 235 - -
Bva05g02167 237 PANTHER OS07G0101800 PROTEIN 25 235 - -
Bva05g02167 237 ProSitePatterns Zinc finger C2H2 type domain signature. 65 85 IPR013087 -
Bva05g02167 237 Pfam C2H2-type zinc finger 63 87 - -
Bva05g02167 237 SMART c2h2final6 63 85 IPR013087 -
Bva05g02167 237 SUPERFAMILY beta-beta-alpha zinc fingers 60 89 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02167 Bva-Chr5 16423978 16424691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02167 26 234 C2H2 Transcription Factor Family AT3G23130 43.062 2.46e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva05g02167 zf-C2H2_6 4.5e-07 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02167 - - vvi:100263211 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02167 05 16423978 16424691 Bva05g02167 05 16423978 16424691 ECH