Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02156 ATGGATGGATTTTTCCCTGAGAAATTCCTGGATGAAATTTTATCCGATGAGCCTCTTCCTTGTGCAAGTGAAAGCACTTCTATTCCGGACATGGAATTATCCACCGGAATTGAATTTGAGCAGGAAAGTTTTGATCTTGGATTACCCAGTTTCCAGAACTTGATAGAAGAAGCTCTTCCTCCTTCAAATCAAAGTGCTTTTTTCCAATGTACAAACATACCCAGAATCGGATTTGGGCATGAAAGttctcaaaatttatcaatttcccAGAATTTGAATGAGAGAAACAGTTGCCAAATACAGAGAACAGAGACTGAAGAATACGAAAGGGAACGCGCAACCGGGCATGTGATCAATGAGAGAATGAGGAGATATAGGCAGAGGCAGTGCTGCATTGCCCTGCATTCCATGTTACCTCAAGGAACCAAAACTGATAATAATTCAGTAATTTTAATGGCAATGAAGGAAATTAATAGGCTTCAGAGTTGCAGGGAAGAGCTtcagagagaaaattttgagcTTGAAGGTAGTCTTCAAGCTCTAGTGGAGAGGAAAAGAGTTGGTGGAACCAAAATTCAGTTCAAGATTCCTAGATCTGCATCTGGGATTGATTCAATGGTCGAGATCCTTAAGTGCTTGAAGATCCTTGGTGTCAATACCAAAAGCATCAAAGCCAATTTCTCCTCTGAAGAGTTGTTTGCAGTGTTGGAGACAGAAACAcagATTGCAGATAAAGAGGTGGAAAGGGCAATTGAGAGAACTCTAAGGAGGTTGAGTGGAAGTTGCAATCCCAATTCTTA 800 0.3875 MDGFFPEKFLDEILSDEPLPCASESTSIPDMELSTGIEFEQESFDLGLPSFQNLIEEALPPSNQSAFFQCTNIPRIGFGHESSQNLSISQNLNERNSCQIQRTETEEYERERATGHVINERMRRYRQRQCCIALHSMLPQGTKTDNNSVILMAMKEINRLQSCREELQRENFELEGSLQALVERKRVGGTKIQFKIPRSASGIDSMVEILKCLKILGVNTKSIKANFSSEELFAVLETETQIADKEVERAIERTLRRLSGSCNPNS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02156 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 111 160 IPR011598 GO:0046983
Bva05g02156 266 Coils Coil 150 184 - -
Bva05g02156 266 CDD bHLH_AtbHLH_like 116 168 IPR045239 -
Bva05g02156 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 107 172 IPR036638 GO:0046983
Bva05g02156 266 SMART finulus 117 166 IPR011598 GO:0046983
Bva05g02156 266 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 54 257 IPR044658 -
Bva05g02156 266 PANTHER TRANSCRIPTION FACTOR BHLH92 54 257 - -
Bva05g02156 266 Gene3D - 101 176 IPR036638 GO:0046983
Bva05g02156 266 Pfam Helix-loop-helix DNA-binding domain 115 161 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02156 Bva-Chr5 16344543 16345768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02156 109 242 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 37.857 6.95e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02156 - - gmx:100815874 203.371