Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02140 ATGGCTCGGGACGGGAGTGTTGTCCCGGTGGACCCGCAGGCTCTGGTGGGTGCGAAGAAGAAGACACAATCGTCAAGGAGTTGGATTATACTGAATGCTACAGGGGAAGGTACAATTTTGGATGCAGACAAATATGCCATTATGCACAGAGTTGATATTCATGCTCGTGATCTTCGGATCCTTGATCCTTTGCTATCATACCCATCTACGATTCTGGGTCGTGAGAAGGCTATTGTTCTGAACTTAGAGCATATCAAAGCAATTATCACTGCCGAAGAGGTATTGCTGAGACATCCATCAGACGAAAATGTGATCCCTGTTGTTCAGGAGCTTCAAAGGAGATTGCCTCTTCAGCAACGTGGTGGTCAACATGACCTTGAAGCAGCTGAAGAAGATGAGTCTCCCTTTGAATTCCGAGCTCTGGAGGTAGCTTTGGAGGCTATTTGTAGTTTCCTTGCTGCACGTACAACAGAATTGGAGACAGCTGCTTATCCTGCACTAGATGAGCTCACCTCCAAGATTAGTAGTCGTAATTTGGATAGAGTTCGTAAGATCAAGAGTGCAATGACAAGGCTAACAGCTAGGGTTCAAAAGGTGAGAGACGAGCTTGAACAACTTCTGGATGATGACGACGACATGGCTGACCTCTACTTATCAAGAAAGTTGGTTGGCATATCTTCACCAGTGAGTGGATCAGGTTTTGCCAATTGGCTTCCTGGATCCCCCACCATAGCCTCGAAGATATCTAGAGCAAGTAGAGCTAGTATGGCAACAATTCATGGAGATGAGAATGATGTGGAGGAGCTTGAAATGTTGCTGGAGGCTTATTTCATGCAAATTGATGGCACATTGAACAAATTAAGCACACTACGAGAGTATATTGATGACACAGaagattatattaatattcagCTTGACAATCATCGAAATCAACTGATCCAGTTAGAGCTCTTTCTTAGTTCAGGAACTGCTTGTCTAGCTTTCTACTCTTTGGTGGCTGGAATATTTGGCATGAACATCCCATATACATGGAACGACAACCACGGTTACATGTTCAAATGGGTGGTCATTGTTACCGGAGCAGCTTCTGCTGTAGCTTTTGTCTTTGTTATGATCTATGCTCGCAAAAAGGGGTTGGTGGGATCGTG 1148 0.4425 MARDGSVVPVDPQALVGAKKKTQSSRSWIILNATGEGTILDADKYAIMHRVDIHARDLRILDPLLSYPSTILGREKAIVLNLEHIKAIITAEEVLLRHPSDENVIPVVQELQRRLPLQQRGGQHDLEAAEEDESPFEFRALEVALEAICSFLAARTTELETAAYPALDELTSKISSRNLDRVRKIKSAMTRLTARVQKVRDELEQLLDDDDDMADLYLSRKLVGISSPVSGSGFANWLPGSPTIASKISRASRASMATIHGDENDVEELEMLLEAYFMQIDGTLNKLSTLREYIDDTEDYINIQLDNHRNQLIQLELFLSSGTACLAFYSLVAGIFGMNIPYTWNDNHGYMFKWVVIVTGAASAVAFVFVMIYARKKGLVGS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02140 382 Gene3D Magnesium transport protein CorA, transmembrane region 106 312 - -
Bva05g02140 382 PANTHER MAGNESIUM TRANSPORTER MRS2-I 1 382 - -
Bva05g02140 382 CDD Mrs2_Mfm1p-like 28 379 IPR039204 -
Bva05g02140 382 Coils Coil 182 209 - -
Bva05g02140 382 Gene3D - 14 98 - -
Bva05g02140 382 Gene3D Magnesium transport protein CorA, transmembrane region 319 378 - -
Bva05g02140 382 Pfam CorA-like Mg2+ transporter protein 267 370 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bva05g02140 382 SUPERFAMILY Magnesium transport protein CorA, transmembrane region 318 370 IPR045863 -
Bva05g02140 382 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 1 382 IPR039204 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02140 Bva-Chr5 16194659 16198454 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02140 1 355 MRS2 Gene Family AT5G64560 78.533 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02140 K16075 - csin:114310922 589.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02140 05 16194659 16198454 Bva05g02140 05 16194659 16198454 ECH