Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02133 ATGGAGCCCCTCAAATGCTCCCTTCCAACTTCCAACTGTGAGACTGATTTCCAGAAAAAAGTGCTTTATCAGGAGTCAATTGGTATCgattctttctctcttattgAAAATCATCCATTGCTGATCTCTGCTCCCCTTGCTGACATAAAATCTACAGTGGAGTTTATGACCTCCATGGAATTCACTGCAATTGAGTTTCGTCGCATTGTTGGCATGTGCCCAGAGGTTCTCACCACCAAGGTGTCAGACATCGTACCTGTCTTCACCTTCCTTATCCACGAGGAGGCTCATGTAAATGGTTCAGATATCAAGCGGGTAATAAATCAACGACCCAGGTTGCTTGTCTGCAGTGTTAACAAGCAACTTCGTCCCACCTTATACTTCCTACGAAGTATTGGGATAGAAGAGGTAAACGGGCACACTTATTTGCTATCATGTAGTGTCGAAGAAAAGCTTATACCCCGGATCAGTTACTTTGAAAATATTGGTTTTTCTCGCCGTGATGCAACTTCTATGTTTCGAAAATTTCCACAGCTGTTTTGTTATAGCATTAAGAATAACTTGGAGCATAAACACAATTACTTTGTGGTGGAAATGGGAAGAGATCTGAAGGAGCTGAAAGATTTTCCACAGTACTTCTCATTGAGCTTAGAGAAAAGGATTAAACCTAGGCATAAACTATGTGTAGAATTGGGGGTGTGTTTTCCTCTCCCTGTATTGTTAAAGACAAGTGAATCGCAATTCCGCAACAGATTAGATGTATGTGTCAATTCTTCGATACCCCGGAAAACATCTCCATTGTGGTGTTTTAGTTgtgaaattgaata 827 0.399 MEPLKCSLPTSNCETDFQKKVLYQESIGIDSFSLIENHPLLISAPLADIKSTVEFMTSMEFTAIEFRRIVGMCPEVLTTKVSDIVPVFTFLIHEEAHVNGSDIKRVINQRPRLLVCSVNKQLRPTLYFLRSIGIEEVNGHTYLLSCSVEEKLIPRISYFENIGFSRRDATSMFRKFPQLFCYSIKNNLEHKHNYFVVEMGRDLKELKDFPQYFSLSLEKRIKPRHKLCVELGVCFPLPVLLKTSESQFRNRLDVCVNSSIPRKTSPLWCFSCEIE 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02133 275 SMART mt_12 203 234 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 SMART mt_12 67 97 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 SMART mt_12 170 202 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 SMART mt_12 32 62 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 SMART mt_12 136 165 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 SMART mt_12 104 135 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 PANTHER CGI-12 PROTEIN-RELATED 21 262 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 Gene3D Transcription termination factor 3, mitochondrial 5 93 IPR038538 -
Bva05g02133 275 Gene3D Transcription termination factor 3, mitochondrial 94 256 IPR038538 -
Bva05g02133 275 Pfam mTERF 95 248 IPR003690 GO:0003690|GO:0006355
Bva05g02133 275 PANTHER OS03G0360600 PROTEIN 21 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02133 Bva-Chr5 16139640 16140570 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva05g02133 mTERF 9.9e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02133 K15032 - ahf:112704905 428.713