Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02127 ATGGATCCCGGGGTGCCACGGCCCACCCCACAGCCGCCGCGATCCGCCGCCACCGTACTTGGGAAGTACCGATTGACCCGCCTTCTCGGTCGCGGTAGCTTTGCGAAAGTATACCAGGGAGAATCCTTGATCGACAACTCTTCTGTCGCCGTTAAAATCATCGACAAGGCTAAAACTGATGCCGTCATGGAACCCCGCATTGTCCGTGAAGTTGATGCCATGCGCCGCCTCCAACACCACCCGAACATCATTAAAATCTACGAGGTGATGGCTACAAAATCTAAGATCTACTTCATCGTGGAGTTCGCCGTCGGCGGTGAGCTCTTCTCGAAAATCTTGCGCAGAGGGCGGTTAACAGAACCGGTGGCGCGCCGTTATTTCCAGCAATTGGTTTCCGCCCTTTGTTTCTGCCACCAAAACGGCGTCGCACACCGCGATCTTAAGCCCCAGAATCTCCTCCTAGACAAGGACGGTAATCTAAAAGTATCGGATTTCGGGCTATCGGCTTTACCCGAACAGCTGAAAAACGGGTTGCTCCACACGGCTTGTGGGACGCCGGCTTACACGGCTCCCGAGATCCTCTGCCGGCACAGCTATGACGGCTCGAAAGCCGATGCGTGGTCTTGCGGGCTCATTCTCTACGTTCTTCTTGCTGGTTTTCTCCCATTCGACGACTCGAATATCCCAGCGATGTGCAAGAAAATTAGCCGGCGCGATTACCAGTTCCCAGAGTGGATTTCCAAACCGGCGAGATACGTGATATACCGTCTCCTCGACCCGAACCCGAATACCCGAATGAGCTTAGAATCCCTGTTTCAGAACTCATGGTTCAAGAAGCAGCTAAAACCACAGCTGGAAGAGAGCCTATTCGAATCGGGTCCATACGCAAAATCATACCACCATAAATCGGAGCTTCTATCTTCGGGCGTGAACGCTTTTGACATAATTTCCATGTCTTCGGGTTTGGACCTGAGGGGGCTGTTCGAAACGACACCGGATAACAGAAAGGAGAAGAGGTTCACGTCGAAGGGTTCTGTGGAGAAGGTAGAGGAGAAGGTGAAGGAGATAGGagggggtttagggtttaagattGAGAAGGGCAAAAATGGGGCAATTGGGTTAGGGAAAGGGAAGGTAGTTTTAGTAGTTGAGGTGTTTGAAATTGTGCCTGAACTAGTTTTGGTGGCAGTGAAAGTGGTAGATGGGGGAATAGAGTTTGAGGAGGTTCACTGGGGGGATTGGAAAGCTGGGTTACAAGAAATTGTTGTCTCTTGGCACAAGGAAGCACTGTA 1292 0.5093 MDPGVPRPTPQPPRSAATVLGKYRLTRLLGRGSFAKVYQGESLIDNSSVAVKIIDKAKTDAVMEPRIVREVDAMRRLQHHPNIIKIYEVMATKSKIYFIVEFAVGGELFSKILRRGRLTEPVARRYFQQLVSALCFCHQNGVAHRDLKPQNLLLDKDGNLKVSDFGLSALPEQLKNGLLHTACGTPAYTAPEILCRHSYDGSKADAWSCGLILYVLLAGFLPFDDSNIPAMCKKISRRDYQFPEWISKPARYVIYRLLDPNPNTRMSLESLFQNSWFKKQLKPQLEESLFESGPYAKSYHHKSELLSSGVNAFDIISMSSGLDLRGLFETTPDNRKEKRFTSKGSVEKVEEKVKEIGGGLGFKIEKGKNGAIGLGKGKVVLVVEVFEIVPELVLVAVKVVDGGIEFEEVHWGDWKAGLQEIVVSWHKEAL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02127 430 PANTHER SERINE/THREONINE KINASE 15 428 - -
Bva05g02127 430 CDD CIPK_C 311 419 - -
Bva05g02127 430 Gene3D Transferase(Phosphotransferase) domain 1 14 310 - -
Bva05g02127 430 SMART serkin_6 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02127 430 Pfam NAF domain 310 366 IPR004041 GO:0007165
Bva05g02127 430 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Bva05g02127 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Bva05g02127 430 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 15 428 - -
Bva05g02127 430 Gene3D Kinase associated domain 1, KA1 311 424 - -
Bva05g02127 430 ProSiteProfiles Protein kinase domain profile. 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02127 430 SUPERFAMILY Protein kinase-like (PK-like) 19 295 IPR011009 -
Bva05g02127 430 ProSitePatterns Protein kinases ATP-binding region signature. 29 52 IPR017441 GO:0005524
Bva05g02127 430 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02127 Bva-Chr5 16110454 16112198 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02127 8 430 Miscellaneous Gene Families AT3G23000 58.621 9.21e-169 478
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva05g02127 Pkinase 4.9e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02127 K12761 - gmx:100784173 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02127 05 16110454 16112198 Bva05g02127 05 16110454 16112198 ECH