Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02106 ATGTCTCAGATACTGCTGATAAATTTGGGGTGCATGGAATCGTTTCTCAGTGTGCCCAACAACGTTGGTAAACTCAACAAACGATGGCATTCTGCTTTTTTCACCATTTGTTGTTCCAGGGCTATTCTGTCTCACTTCAAAGATAATGTAGCCATCGGAAAGAGAGCAAAGGTTAGACCTTGTTCGTCTTTTTCCATTGTTGATTTGAACCCATACCAATCCTTTAGTATTGACCAAACAAGTCTGACAGAGATtactaaagagaaaaatctagAGAGGCTTCAAAACTTTGGTGGGGTTGATAAGGTAACTTCTGCTCTAGAAACTAGTGTTGATTATGGTATCCTAGGTGATGAAAAAGACATTGCCCGCCGACATGATGTCTTTGGCTCCAACACTTACCACAAACCGCCTTCAAAGGGTTTCTTTCACTTTGTGCTCGAAGCATTTAAGGATCCATTAATCATCATATTGTTGATATGTGCCCTACTCTCTCTTGGTTTACAAATTTATCGAGAAGGACTGAAACATGGTTGGTATGATGGAGGAAGCATTTTCATTGCTGATCTTGCGGTTGTCATTGTGTGTTCTGTTTGTCACTACTTGCCCAATAGACAATTATTGAAACTGGGCAAGAAAATCGAGGTTGAAGTTGTAAGGAATGGGCAGCAGCAGCAGGTTTCTATATCTGAAATTGTTGTAGGAGATGTTGTTTGCTTAAGGAGTGGAAGCCAAGTCCCAGCAGACGGAGTGTTGTTGGAAGGTCACTTACTAAAAGCAGATGAATCAAGCTTAACAGGAGAGCATCAACTTGTAGGTGTCAATAAAGACTTGAATCCATTCTTGTTGTCTGGGAGTAAGGTGGCTTTCGGCCATGGTCGAATGTTGATAACTTCTGTTGGTGAAAACACAAAATGGGGTGAGATGATGAGCTTATTAGGTCATGAATCCCACAAATGGAGATCTTCAAACATTCGGCTCAAAGGGATAACTAGAAGCATGCGTTTATTTGGATCATTGGTAGCAATATGTACGTTCATTGCTATGTTGGGAATACTAGTGGCTCGGTATTTCACAGGACATATGAAGGATGGAGATGGTAAACTGGCGTTTATAATGGGCAAAACAAGAACTAGTTATATATGGACAGATTTAGTTGGAATTATAGTTTCCACAGTGGCTGTTGCATCATCAGCAATCCCTGAAGGATTGCCTTTAGCTATGGCTTTAACAGTTGCTCATGCAATGAAGAGAATGATAAATAATCGTACTCTACTAAAGACGTTCTCTGCTTATGAATCACTTGCCTCAGCCACCACCATATGTACTGACACAAGAGGCATATTGACAGTGAACCGATTGATGATAAGGGCATTTTTCGGTAAAGACCGGATGGAAGAAGGATCATCACATTTTGTTGCAGGAAATGTTCAACAGTTACTCTGCCAAGGAATTGCTTTAATCACATCTCAGGTCCCTTTAGAACCTTCATCTGAGTTCTCAATTGAACAAGCAATTCTCAGTTGGGCCACCATAGAATTGGGCATGGATGCCAAGGGTTTACAGGAAGGTTTCAGCATTCTTAATGCTGAAACCTTGACTGAAGATGGAAAGCTAATCAAGACCATAATAAGGAAGAAGGATGACCACACAATTCATATGCACCTCAAAGGAGAAGCTGAGGTGATACTGGCTACGTGTTCAGATTATTATGGGATTGAAGGGACTGTTAAAACCATAGATAATAGAACAAGAAGAATGTTGCAGTATTTAATCCAAGTGATGGCAAATGATGGATTCAAATGTATTGCATTTTCTCATAAAGTACTTGAGAAAGAAGCTCATGATGATGGTCAACATCAGCAGCAGCTAGAAAATGACtcaaatgaattattatgCCTAATGGCTCTGAAAGATCCTATTGGACCTGGGGTTAGAAGCGCTATAAAAGATTGCAAACAAGCAGGAGTAAACATCAAAGTGATTACAAGCGATGATATCATTAGTGCGGTGGCTATAGCTTCGGAATGTGACATAGTTGACCCTAACGAAGCTATGAACAATAAACAAGTAGTGGAAGCTTCAGAATTCCAGAGCTACACTGTAGCAGAAAGGATAGAGAAACTTGATAACATATGTGTGATCGCAAAAGCCTCTTACACTGACAAGCTTCTAGTGCTACAAACCTTGAAACAGAAAGGTCATGTGGCTGCATTCATAGGAAACAGCACGGGGGACGCTCCTGCTCTGGAAGAAGCAGATGTTGGAATTCATATGGGCTTTCAGCGTAATGACACTGCTGTAGAGAATTCTGATATTGTAGTCCTCAATGGTGGTTTAATGTCTGTTGTTGAGGTATTGCATATGGGACGAGGCTTCTATGACAATTTCAAGGTATTCACTCAGTTTTTGTTTGCTGCAAACATAGCATCAATATTGACAGACTTTGTGTCCACAGTTTCATCTGATCAGACACCTAGAACAATCAACATCGTGGCCGGTGTTTCCACTCATGAAGTCCCATATGCAGTGCTACAAATACTGTGGTTGAAGCTTATAATCGGTACTTTGGCTGCTCTGGCTCTAATTGGAGAGCAGAAAACTGAGAAATTCACGCAAGAGCAACCCACAAGACGAGATGAACCACTCATCAGCCACATTATGTGGAAAAACATATTGATTGATGCTTCATATGAGATAATCATCCTCCTAACTTTGCAATTCAAGGGCACATCAATTTTTGGCGTGGATAACAATGTAAACGACATGATGATCTTTaatcttcttgttttcttccaaGTCTTTGCTATCTTGAAAGCAAGGAAGCCCGAAGTAAATATCTTCACGGGagtacaaagaagaaaattattctGGGGAATTATCTGTGGCATCGTGATCCTACAGGTGGTGTTGGTGGAAATACTGCCACAGGTTACAGTTACTGGAGCTTTGAATGGGTGGCAATGGGGTGCATGCATTGGTATTGCCTTCACGTCTTGGCCAGTTGGATATATAGGCAACAAGCACATTCCTGTCCctaaaaaacctttttttccCAAGTTGTA 3065 0.3993 MSQILLINLGCMESFLSVPNNVGKLNKRWHSAFFTICCSRAILSHFKDNVAIGKRAKVRPCSSFSIVDLNPYQSFSIDQTSLTEITKEKNLERLQNFGGVDKVTSALETSVDYGILGDEKDIARRHDVFGSNTYHKPPSKGFFHFVLEAFKDPLIIILLICALLSLGLQIYREGLKHGWYDGGSIFIADLAVVIVCSVCHYLPNRQLLKLGKKIEVEVVRNGQQQQVSISEIVVGDVVCLRSGSQVPADGVLLEGHLLKADESSLTGEHQLVGVNKDLNPFLLSGSKVAFGHGRMLITSVGENTKWGEMMSLLGHESHKWRSSNIRLKGITRSMRLFGSLVAICTFIAMLGILVARYFTGHMKDGDGKLAFIMGKTRTSYIWTDLVGIIVSTVAVASSAIPEGLPLAMALTVAHAMKRMINNRTLLKTFSAYESLASATTICTDTRGILTVNRLMIRAFFGKDRMEEGSSHFVAGNVQQLLCQGIALITSQVPLEPSSEFSIEQAILSWATIELGMDAKGLQEGFSILNAETLTEDGKLIKTIIRKKDDHTIHMHLKGEAEVILATCSDYYGIEGTVKTIDNRTRRMLQYLIQVMANDGFKCIAFSHKVLEKEAHDDGQHQQQLENDSNELLCLMALKDPIGPGVRSAIKDCKQAGVNIKVITSDDIISAVAIASECDIVDPNEAMNNKQVVEASEFQSYTVAERIEKLDNICVIAKASYTDKLLVLQTLKQKGHVAAFIGNSTGDAPALEEADVGIHMGFQRNDTAVENSDIVVLNGGLMSVVEVLHMGRGFYDNFKVFTQFLFAANIASILTDFVSTVSSDQTPRTINIVAGVSTHEVPYAVLQILWLKLIIGTLAALALIGEQKTEKFTQEQPTRRDEPLISHIMWKNILIDASYEIIILLTLQFKGTSIFGVDNNVNDMMIFNLLVFFQVFAILKARKPEVNIFTGVQRRKLFWGIICGIVILQVVLVEILPQVTVTGALNGWQWGACIGIAFTSWPVGYIGNKHIPVPKKPFFPKL 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02106 1021 Gene3D - 119 314 - -
Bva05g02106 1021 PANTHER CALCIUM-TRANSPORTING ATPASE 9 1002 - -
Bva05g02106 1021 SUPERFAMILY Calcium ATPase, transduction domain A 215 312 IPR008250 -
Bva05g02106 1021 PANTHER CATION TRANSPORTING ATPASE 9 1002 - -
Bva05g02106 1021 Pfam Cation transporting ATPase, C-terminus 841 1005 IPR006068 -
Bva05g02106 1021 Gene3D - 536 640 IPR023299 GO:0000166
Bva05g02106 1021 Gene3D - 452 470 IPR023299 GO:0000166
Bva05g02106 1021 PRINTS P-type cation-transporting ATPase superfamily signature 740 759 - -
Bva05g02106 1021 PRINTS P-type cation-transporting ATPase superfamily signature 442 456 - -
Bva05g02106 1021 PRINTS P-type cation-transporting ATPase superfamily signature 261 275 - -
Bva05g02106 1021 PRINTS P-type cation-transporting ATPase superfamily signature 655 665 - -
Bva05g02106 1021 PRINTS P-type cation-transporting ATPase superfamily signature 764 776 - -
Bva05g02106 1021 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 449 645 IPR023299 GO:0000166
Bva05g02106 1021 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 76 1011 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva05g02106 1021 Gene3D - 439 451 IPR023214 -
Bva05g02106 1021 Gene3D - 641 785 IPR023214 -
Bva05g02106 1021 Pfam haloacid dehalogenase-like hydrolase 532 754 - -
Bva05g02106 1021 SUPERFAMILY HAD-like 589 854 IPR036412 -
Bva05g02106 1021 SMART Cation_ATPase_N_a_2 96 170 IPR004014 -
Bva05g02106 1021 Gene3D - 786 998 - -
Bva05g02106 1021 PRINTS H+-transporting ATPase (proton pump) signature 772 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g02106 1021 PRINTS H+-transporting ATPase (proton pump) signature 740 756 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g02106 1021 PRINTS H+-transporting ATPase (proton pump) signature 588 606 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva05g02106 1021 Pfam Cation transporter/ATPase, N-terminus 99 165 IPR004014 -
Bva05g02106 1021 Pfam E1-E2 ATPase 214 420 - -
Bva05g02106 1021 Gene3D - 148 438 - -
Bva05g02106 1021 SUPERFAMILY Calcium ATPase, transmembrane domain M 98 1006 IPR023298 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02106 Bva-Chr5 15949121 15952486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02106 24 1018 Primary Pumps ATPases AT3G63380 41.504 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02106 K01537 - pop:7467513 883.634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02106 05 15949121 15952486 Bva05g02106 05 15949121 15952486 ECH