Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02103 ATGCCTGTGAGGCAGATGAAGGAAAGCTCGGAGCAACACCTTTTGATAAAAACCCATTTGCAAAACGCCATGAACCCAGTGAAGAAGGCACCAAAAATTGTCCAAAATGGAAAAGGGCCACCGCCACAAGAACCCCAAAACGCCAAACCGCATAGCCAGACTTCACCTCAGGCAAAGAACCGAGGCAGAAGAAGGGGAAGAGGTGGTCGGAAATCCGATCAAGTTGACGTTTTGATGCGGCCCAGTTCGCGGCCGTGCACGGTGGCGGATAAGCCAGTATCAGCCAACCAGGCTCTGGTAGCAAAGAGTGCGAATGGGTCCCTCCCCAATGGCGGCAACAACGATATAGAGATGGGTCTTCCCAATTTTCCCACTTCAAGCAAGTCTTTGAGCTTCGCTCCAAGGCCTGGGTACGGTCAAGTTGGGACAAAATGCATTGTGAAGGCTAACCATTTCTTTGCAGAGTTACCAGACAAGGACTTGAACCAGTATGATGTTACTATTACCCCTGAAGTGTCTTCGAGAACTGTAAACAGAGCCATCATGGCAGAACTCGTGAGGCTATATAAAGAGTCAGACTTGGGGATGAGACTTCCAGCCTATGATGGCAGAAAAAGTCTGTACACAGCAGGGGAGCTTCCCTTTGCTTGGagagagtttaaaattaagcTTGTAGATGAAGAGGATGGAGTCAATGGTCCCAAaagagaaagagaatacaGAGTGGTGATCAAGTTTGTTGCACGGGCCAACTTGTATCACTTGGGCCAGTTTTTAGCTGGTAAGCGTGCTGATGCTCCACAGGAGGCACTTCAAATTCTGGACATTGTACTTAGAGAACTATCAAATAAGAGGTATTGCCCCATTGGGAGGTCATTCTTTTCTCCTGATATTAGAACACCACAACGGCTAGGGGAGGGGTTGGAATCATGGTGTGGATTTTACCAGAGCATAAGACCTACCCAGATGGGCCTTTCACTCAATATTGACATGGCTTCTGCCGCATTTATTGAGCCTCTTCCAGTAGTGGAGTTTGTTGGTCAGCTTCTGGGAAAAGATGTGTTATCAAGGCCATTGTCTGATGCAGATCGTGTCAAGATTAAGAAAGCCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGACATGTCCGAAGAAAATATCGTGTTTCGGGATTGACTTCTCAACCCACAAGAGAACTTGTgTTTCCTGTTGATGACAACTCTACTATGAAGTCGGTGGTTGAATACTTCCAAGAGATGTATGGTTTCACCATTCAGCACACTCACCTTCCTTGTCTTCAAGTGGGAAATCAGAAAAAAGCAAACTATTTACCTATGGAGGCATGCAAAATTGTTGAGGGGCAACGTTATACCAAAAGGTTGAATGAGAAGCAAATCACTGCTCTACTGAAAGTTACTTGTCAGAGACCTAGGGATCGAGAAAATGACATTTTGCGGACAATTCAACATAATGCTTATGATCAAGATCCATATGCGAAGGAATTTGGGATTAAAATCAGTGAAAAGCTAGCTTCTGTTGAAGCACGGATTCTTCCTGCCCCTTGGCTGAAATATCATGAAACTGGCAAAGAAAAGAACTGTTTACCTCAAGTTGGTCAGTGGAATATGATGAACAAGaaaatgaTCAATGGGATGACCGTTAATAGATGGGCATGCATTAACTTTTCGCGGAGTGTGCAAGATAGTGTTGCTAGAAGTTTTTGTAATGAGCTTGCTCAAATGTGTCAAGTATCTGGAATGGAATTTTATCCAGAGCCTGTGATCCCAATCTATAATGCTAAGCCAGAGCAGGTGGAGAAAGCCTTGAAGCATGTTTATCATGTGTCAATGAACAAAACTAAAGGGAAAGAATTAGAGCTTTTGTTAGCAATATTGCCAGATAATAATGGGTCCCTCTATGGTGATCTCAAGCGTATATGTGAAACCGAGCTTGGCTTGATATCACAATGCTGTCTGACAAAACATGTCTTTAAGATTACAAAACAGTACTTGGCTAATGTGTCCTTAAAGATCAATGTTAAGATGGGAGGTAGAAACACCGTTCTACTTGATGCTATAAGCTGCAGAATACCATTAGTTAGTGACATTCCAACCATAATATTTGGAGCAGATGTTACCCACCCTGAAAATGGGGAAGACTCTAGTCCTTCAATAGCAGCTGTAGTAGCATCCCAGGACTGGCCTGAAGTTACAAAATATGCTGGTTTAGTGTGTGCTCAGGCTCACAGACAGGAACTTATACAAGATTTGTACAAAACTTGGCACGATCCTGTTCGTGGCACAGTTAGTGGCGGCATGATCCGAGATCTTTTGGTTTCCTTTAGAAAGGCAACAGGACAGAAGCCACTTAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGGCAATTTTACCAAGTTCTTCTTTATGAGCTGGACGCGATCCGGAAGGCTTGTGCTTCTTTAGAACCCAACTATCAGCCGCCAGTAACATTCATCATCGTACAAAAAAGACATCATACTAGATTGTTTGCCCACAACCATAGGGACAGGAGCAGCACAGATAAGAGTGGGAATATAATGCCTGGCACTGTTGTTGATTCTAAAATCTGTCATCCATCAGAGTTTGATTTTTATCTCTGCAGTCATGCTGGCATTCAGGGAACGAGTCGGCCGGCTCATTATCATGTTCTATGGGATGAGAACAACTTCACAGCAGATGGAATTCAATCTTTGACAAACAACTTGTGTTATACATATGCTAGGTGTACACGCTCTGTGTCTGTTGTTCCTCCGGCATATTATGCACATCTAGCAGCTTTCCGGGCACGTTTCTATATGGAACCGGATGTGCAGGAGAATGGCTCTTCAGGCGGCAGTCATGGTGACAAGGCGGTAACACGAGCAGGAGAATCCGGTGTCCGGCCATTGCCAGCcttgaaagaaaatgtaaagagAGTAATGTTTTATTGTTA 2978 0.4335 MPVRQMKESSEQHLLIKTHLQNAMNPVKKAPKIVQNGKGPPPQEPQNAKPHSQTSPQAKNRGRRRGRGGRKSDQVDVLMRPSSRPCTVADKPVSANQALVAKSANGSLPNGGNNDIEMGLPNFPTSSKSLSFAPRPGYGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVSSRTVNRAIMAELVRLYKESDLGMRLPAYDGRKSLYTAGELPFAWREFKIKLVDEEDGVNGPKREREYRVVIKFVARANLYHLGQFLAGKRADAPQEALQILDIVLRELSNKRYCPIGRSFFSPDIRTPQRLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVVEFVGQLLGKDVLSRPLSDADRVKIKKALRGVKVEVTHRGHVRRKYRVSGLTSQPTRELVFPVDDNSTMKSVVEYFQEMYGFTIQHTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTIQHNAYDQDPYAKEFGIKISEKLASVEARILPAPWLKYHETGKEKNCLPQVGQWNMMNKKMINGMTVNRWACINFSRSVQDSVARSFCNELAQMCQVSGMEFYPEPVIPIYNAKPEQVEKALKHVYHVSMNKTKGKELELLLAILPDNNGSLYGDLKRICETELGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTVSGGMIRDLLVSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIIVQKRHHTRLFAHNHRDRSSTDKSGNIMPGTVVDSKICHPSEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDVQENGSSGGSHGDKAVTRAGESGVRPLPALKENVKRVMFYC 992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02103 992 Pfam Piwi domain 629 948 IPR003165 GO:0003676
Bva05g02103 992 Pfam Mid domain of argonaute 537 614 IPR032473 -
Bva05g02103 992 SMART Piwi_a_2 628 949 IPR003165 GO:0003676
Bva05g02103 992 MobiDBLite consensus disorder prediction 1 89 - -
Bva05g02103 992 SMART PAZ_2_a_3 344 476 IPR003100 GO:0005515
Bva05g02103 992 Pfam PAZ domain 366 470 IPR003100 GO:0005515
Bva05g02103 992 Gene3D - 518 691 - -
Bva05g02103 992 Pfam Argonaute linker 1 domain 288 337 IPR014811 -
Bva05g02103 992 Pfam Argonaute linker 2 domain 480 526 IPR032472 -
Bva05g02103 992 SUPERFAMILY PAZ domain 334 494 IPR036085 GO:0005515
Bva05g02103 992 ProSiteProfiles Piwi domain profile. 628 949 IPR003165 GO:0003676
Bva05g02103 992 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 60 991 - -
Bva05g02103 992 CDD Piwi_ago-like 498 948 IPR045246 -
Bva05g02103 992 Gene3D - 697 992 IPR036397 GO:0003676
Bva05g02103 992 CDD PAZ_argonaute_like 339 453 - -
Bva05g02103 992 Pfam N-terminal domain of argonaute 144 278 IPR032474 -
Bva05g02103 992 Gene3D paz domain 333 458 - -
Bva05g02103 992 SUPERFAMILY Ribonuclease H-like 618 950 IPR012337 -
Bva05g02103 992 SMART DUF1785_2 287 339 IPR014811 -
Bva05g02103 992 PANTHER PROTEIN ARGONAUTE 10 60 991 - -
Bva05g02103 992 ProSiteProfiles PAZ domain profile. 340 454 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02103 Bva-Chr5 15921221 15929120 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02103 1 992 Eukaryotic Initiation Factors Gene Family AT5G43810 82.054 0.0 1676
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02103 K11593 - vvi:100244311 1846.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02103 05 15921221 15929120 Bva05g02103 05 15921221 15929120 ECH