Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02102 ATGCAGCTTGTTAATTCTGAAGAGATTTCCTCCGGAGCTCGCGAATTTCCTGCGAAACCCGAAGAAGATAAGTCATTGAGCTCTTCCTCGATTGAAGACGATGACTGTGGCATAGACGACGATGTGGGTCTCGACATTTCTGGGAAAAGTCTGGATTTTCCGGTTTTGGAGAATGCAAAGGATTCTGTGGAGGGTTTATATCTCTATAAGAATGTTTACAGTTTGATCCCAAAGTCACTGAGTGCTCTTAGGCGGTTGAGGATGTTGAAATTCTTTGGGAATGAGATTAATTTGTTTGCCCCTGAGTTTGGGAACTTGACGGGGTTGGAGAGCTTGCAGATGAAAATATCTTCGCCCGGGATTGGAGGGTTGCCATTGCATAAGTTGAAGGGTTTGAAGGAGCTCGAGCTGTGCAAAGTGCCTCCTCGACCTTCTGCTTTCCCAATTTTGAGTGAGATTGCTGGTCTTAAGTGTTTGACCAAACTTGCTATTTGCCATTTTTCTATAAGaTACCTTCCTCCAGAAATTGGTTGCTTAGAGAATCTAGAGGATCTTGATCTTTCTTTCAATAAGATAAAGACATTGCCCTCTGAAATTGGTTATTTGAATGGTTTGATATCCTTGAATGTTGCAAATAATAAGTTGGTGGAGCTACCGTCAGCTATGTCTTCTCTTTCAAAGCTGGAGAAGTTGGACCTGTCAAATAATAGGTTAACTTCATTGGGATCACTTGAACTCAGTTCTATGCAAAAACTTCAGAACCTAAATCTTCAGTACAATAAGCTTCTCAGCATTTTTGAAATACCTTCATGGATATGCTGTAATTTGGAAGGAAATGGCAGAGGCACAAGTGCTGATGATTCTAGCAACTTGTCTGTTGAAATGGATGTCTATGAAACCAGTTTACCGGAGAATGATGGAACACTAACTCTTGGCTGTCATAATACCTCTTCCAGCCTGACTAGCCCCTCATCTAACAATAGATGTTTCGCAGCTCGGAAATCAGGTAAAAAGTGGAAGAGACGGTATTATTTACAGCAGAAGGCCCGTCAAGAACGCTTAAACAACAGCAGGAAGTGGAAAGGTGTGGATCACACTGAGTTGTTAAGTGAGAAGATTCACAAAGTTTCTGAATCAGGAAACCTGGACAATCTTTCTTCTGAAAGTTGTACAGAACCAGTATCAGACAATGCAAATATGAATGGCAGTGATAAAAGAGTATTCTCTGAAcaagcaagaaaggaaaaatttgttgataatGTTAATAAAGAAGCAGGTATCAAGAAGGATCTTTCTAGGGAAGATTGCTGCCCTGCTGACTGTAAGGATGGAGTCTTCACCTCAGAGAATGGACCTAACGAACAGGAAGAAGCATCATGTTCAGAAACTTCAAAGTGTTCTTCTAAATCAAAGAGGCATTCTGATCGAGATCTTGATAATCCCAAACCATGCAAGTCTAGAAAACCGATTGGGGATAGCTCCTTATTGTCTCACAAGTACAGTAACATCTCATATTGTGGAATTGAAGATCATCTACCAGATGGCTTTTACGATGCAGGACGTGATCGGCCTTTTATGCCCCTTGAGAGTTATGAAAAAAGTCAATGTCTTGCCTCCCGTGAAGTCATTGTATTAGACAGAGATATTGATGAAGAGTTGGATGCTATTACACTCTCTGCTCAGTCATTGGTGTTTCATTTGAAACAGTTGAACAATTTAACCAGACATGGGAATCCAGCCGCTGTTGACAACCTTCAGATTGCTTCTCTGCTTGCTCTTTTTGTATCAGATCATTTTGGTGGCAGTGACAAAAGTGCTATGGTAGAAAGGACACGGAAATCTGTGTCTGGTTCAAATTATCAGAAGCCTTTTGTCTGTACATGCTCAACTGGAAGCAGCAGTAATATTTGTGATTCCACTAAACCAGCCGTAGACACTGTGgaggatataattttttctgacATATGTGAGAAATCTCTTCGCTCTATTAAAGCAAAACGAAGTTCAATCATAGTTCCTATTGGAGCTGTACAGTTTGGTGTCTGTAGACATAGAGCTCTACTTCTGAAGTATTTATGTGATCGTATGGAGCCACCAGTACCATGTGAGCTTGTCAGGGGTTACCTGGATTTTTTACCGCATGCCTGGAATACCATTATGATTAAGAGGGGTGATTCATGGGTTCGAATGCTAGTTGATGCATGCCGACCACATGatataagagaagagaaagaccCTGAGTACTTTTGCAGGTATATACCTCTTAGTCGAACTGAAGTCCCTCTTTCAAATAGCGAAAGTCCAAATCCTGGTTGTTCCTTTCCATCTGCATCTACCTGTGATGAAATTCTAAAAGCAGTTTCTAGTACATTAGTTCGGTGTAATTTTGGATCAGTTGTGGCTGCTGCAAAGGTACGTACTTTGAAAATGCAGCAGAGTTCTGCAGATGAAATTAGAAAGTTTGAATATAATTGTTTGGGAGAAGTGAGAATTCTTGGTGTCTTGAAGCACCCTTGTATGGTGAAAATGTATGGGCACCAAATATCATGCAAGTGGACACTCTCAGCAAATGGAAATCCTGAAGGCCGTGTATTAAGGTCTGCAATTTTTATGGAGTATGTGGAAGGAGGCTCTTTAAAAAGCTATCTAGAGAAGTTATTGGAATCTGGTGAAAAGCATGTTTCAGCAGAGTTGGCTTTAAATATTGCCAGAGATGTAGCGAGTGCTTTGATGGAGTTGCATGCAAAGCACATTATTCATCGTGacataaaaagtgaaaacattCTGATTGATTTGGATAGGAAGAGAGATGATGGAACCCCCACTGTGAAGCTCTGCGATTTTGATAGAGCAGTGCCGTTAAGGTCTCTTTCACATTCATGTTGTATTGCCCATATGGGAATACCTCCACCGGATGTTTGTGTTGGAACTCCACGATGGATGGCTCCAGAAGTTATGCGGACAATGTATGAAAAGAATACTTATGGTTTGGAAGCTGATATTTGGTCATTTGGGTGTTTACTTCTGGAGTTGCTGACTCTGCAAGTTCCATATTCTGGATTATCTGATTCACAATTCCATGACATGCTACAGATGGGCAGAGGACCACAATTAACAGATGAGCTGGAGGAATTGAGTTCTCAAAATGAACCCACATCGATTCAATCCGGTAAAGAGCCGGGAAAATCAGATGCTGATGCAGACGTATTGAAATTCcttgttaatttgtttcataGATGCATGGAAGAAAATCCAGCCAAACGTCCCACAGCTGAGGAAATCTATGATATGCTGCTTGAGCAGACGCGCCGTGGGCAAGATCAAGATGTTAGAGATAGTTA 3341 0.4017 MQLVNSEEISSGAREFPAKPEEDKSLSSSSIEDDDCGIDDDVGLDISGKSLDFPVLENAKDSVEGLYLYKNVYSLIPKSLSALRRLRMLKFFGNEINLFAPEFGNLTGLESLQMKISSPGIGGLPLHKLKGLKELELCKVPPRPSAFPILSEIAGLKCLTKLAICHFSIRYLPPEIGCLENLEDLDLSFNKIKTLPSEIGYLNGLISLNVANNKLVELPSAMSSLSKLEKLDLSNNRLTSLGSLELSSMQKLQNLNLQYNKLLSIFEIPSWICCNLEGNGRGTSADDSSNLSVEMDVYETSLPENDGTLTLGCHNTSSSLTSPSSNNRCFAARKSGKKWKRRYYLQQKARQERLNNSRKWKGVDHTELLSEKIHKVSESGNLDNLSSESCTEPVSDNANMNGSDKRVFSEQARKEKFVDNVNKEAGIKKDLSREDCCPADCKDGVFTSENGPNEQEEASCSETSKCSSKSKRHSDRDLDNPKPCKSRKPIGDSSLLSHKYSNISYCGIEDHLPDGFYDAGRDRPFMPLESYEKSQCLASREVIVLDRDIDEELDAITLSAQSLVFHLKQLNNLTRHGNPAAVDNLQIASLLALFVSDHFGGSDKSAMVERTRKSVSGSNYQKPFVCTCSTGSSSNICDSTKPAVDTVEDIIFSDICEKSLRSIKAKRSSIIVPIGAVQFGVCRHRALLLKYLCDRMEPPVPCELVRGYLDFLPHAWNTIMIKRGDSWVRMLVDACRPHDIREEKDPEYFCRYIPLSRTEVPLSNSESPNPGCSFPSASTCDEILKAVSSTLVRCNFGSVVAAAKVRTLKMQQSSADEIRKFEYNCLGEVRILGVLKHPCMVKMYGHQISCKWTLSANGNPEGRVLRSAIFMEYVEGGSLKSYLEKLLESGEKHVSAELALNIARDVASALMELHAKHIIHRDIKSENILIDLDRKRDDGTPTVKLCDFDRAVPLRSLSHSCCIAHMGIPPPDVCVGTPRWMAPEVMRTMYEKNTYGLEADIWSFGCLLLELLTLQVPYSGLSDSQFHDMLQMGRGPQLTDELEELSSQNEPTSIQSGKEPGKSDADADVLKFLVNLFHRCMEENPAKRPTAEEIYDMLLEQTRRGQDQDVRDS 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02102 1113 MobiDBLite consensus disorder prediction 448 465 - -
Bva05g02102 1113 MobiDBLite consensus disorder prediction 14 30 - -
Bva05g02102 1113 MobiDBLite consensus disorder prediction 466 486 - -
Bva05g02102 1113 SUPERFAMILY Protein kinase-like (PK-like) 800 1098 IPR011009 -
Bva05g02102 1113 MobiDBLite consensus disorder prediction 1 35 - -
Bva05g02102 1113 Pfam Leucine rich repeat 205 262 IPR001611 GO:0005515
Bva05g02102 1113 SMART serkin_6 785 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02102 1113 MobiDBLite consensus disorder prediction 447 490 - -
Bva05g02102 1113 PRINTS Leucine-rich repeat signature 182 195 - -
Bva05g02102 1113 PRINTS Leucine-rich repeat signature 225 238 - -
Bva05g02102 1113 Pfam Ethylene-responsive protein kinase Le-CTR1 654 733 - -
Bva05g02102 1113 MobiDBLite consensus disorder prediction 379 406 - -
Bva05g02102 1113 SMART LRR_sd22_2 225 246 - -
Bva05g02102 1113 SMART LRR_sd22_2 179 204 - -
Bva05g02102 1113 SMART LRR_sd22_2 249 270 - -
Bva05g02102 1113 ProSiteProfiles Protein kinase domain profile. 785 1098 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02102 1113 MobiDBLite consensus disorder prediction 378 408 - -
Bva05g02102 1113 Pfam Protein kinase domain 811 1095 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva05g02102 1113 Gene3D Ribonuclease Inhibitor 5 145 IPR032675 -
Bva05g02102 1113 ProSiteProfiles Leucine-rich repeat profile. 181 202 IPR001611 GO:0005515
Bva05g02102 1113 SMART LRR_typ_2 202 224 IPR003591 -
Bva05g02102 1113 SMART LRR_typ_2 179 200 IPR003591 -
Bva05g02102 1113 SMART LRR_typ_2 83 105 IPR003591 -
Bva05g02102 1113 SMART LRR_typ_2 225 248 IPR003591 -
Bva05g02102 1113 SMART LRR_typ_2 249 275 IPR003591 -
Bva05g02102 1113 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 64 1103 - -
Bva05g02102 1113 SUPERFAMILY RNI-like 52 267 - -
Bva05g02102 1113 Gene3D Transferase(Phosphotransferase) domain 1 782 1112 - -
Bva05g02102 1113 Gene3D Ribonuclease Inhibitor 146 357 IPR032675 -
Bva05g02102 1113 ProSiteProfiles Leucine-rich repeat profile. 227 248 IPR001611 GO:0005515
Bva05g02102 1113 PANTHER BNAC08G43810D PROTEIN 64 1103 - -
Bva05g02102 1113 ProSiteProfiles Leucine-rich repeat profile. 251 272 IPR001611 GO:0005515
Bva05g02102 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Bva05g02102 1113 SMART LRR_bac_2 179 198 - -
Bva05g02102 1113 SMART LRR_bac_2 202 221 - -
Bva05g02102 1113 SMART LRR_bac_2 225 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02102 Bva-Chr5 15899741 15907639 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02102 828 1096 MAP Kinase Kinase Kinase AT1G63700 28.996 4.23e-24 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Bva05g02102 Pkinase 1e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02102 - - gmx:100811118 1543.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02102 05 15899741 15907639 Bva05g02102 05 15899741 15907639 ECH