Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva05g02095 ATGGATCCTCGTCGTAGTGTGGAGGGGTTTCCGGGTTCAAGTTCGTCTTTTTCTGGAGAGCAGCATCACAGGGTTCCTCCTCCTCAACCAATGGACGGACTTCATGAAACTGGCCCTCCACCATTTCTCACCAAAACTTATGATATTGTTGATAACCCTTCCACAAATCATATAATCTCCTGGAGCAAAGGGAATAACAGCTTCGTCGTGTGGGATCCCCAGGCCTTCTCCTTGAGTCTTCTTCCCAGATACTTCAAGCACAACAATTTCTCCAGCTTTGTCAGGCAGCTAAATACATATGGGTTTAGAAAAGTTGATCCAGATAGGTGGGAGTTTGCTAACGAAGGGTTTCTGAGAGGGCAAAGGCATCTTTTGAAGGATATTAGGAGAAGGAAATCACCTCAAACTCAGTCTTTACAGCAAGCACTAGACCCTTGTGTTGAAGGGGGAAGGTTTGGATTAGATGGAGAAGTTGATCGGCTAAAGCGTGACAAGCAGGTTCTAATGGTGGAACTGGTTAAACTCAGACAACAACAGCAGAATACGAGAAGTTACCTTCAAGCAATGGAAGGAAGGCTCAAGAAGACCGAGCAGAGGCAGCAACAGATGATGAACTTCTTGGCAAGAGCAATGCAGAACCCCAACTTCCTGCAACAGTTGGTTCagcagaagaaaatgagaaaagagcTGGAGGAAGCTTTctccaagaagagaagaaggcCTATTGATCGAGGACCTTATGTTAATAGTGTTGGAGTAGAAGAATTAGCCCATAATCAAGATCAGTGTTCAGCTTTTGTGAAACTTGAACCGCAGGAATACACTCATGACATGACAGATTTTGAAGTTGCAGACCTGGAACTTGCGATGAACATGGAGGGATCAAAAAGTGGAAGCCAGAAGCAGATAGAGGAAGACCACATGGAGAAAGTTGAAATTGGAATTAGAGATAGAAACATTAATGATGAAGTGTTTTGGGAAGATTTATTGAATGATGAAGAAGACCTATTAGGTGTGGAAGAACATGTAGATGTTTTGGTTGAGGAACTTGGCCATTTGGGCTCCAGTTCTAAATA 1076 0.4182 MDPRRSVEGFPGSSSSFSGEQHHRVPPPQPMDGLHETGPPPFLTKTYDIVDNPSTNHIISWSKGNNSFVVWDPQAFSLSLLPRYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQRHLLKDIRRRKSPQTQSLQQALDPCVEGGRFGLDGEVDRLKRDKQVLMVELVKLRQQQQNTRSYLQAMEGRLKKTEQRQQQMMNFLARAMQNPNFLQQLVQQKKMRKELEEAFSKKRRRPIDRGPYVNSVGVEELAHNQDQCSAFVKLEPQEYTHDMTDFEVADLELAMNMEGSKSGSQKQIEEDHMEKVEIGIRDRNINDEVFWEDLLNDEEDLLGVEEHVDVLVEELGHLGSSSK 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva05g02095 358 MobiDBLite consensus disorder prediction 1 40 - -
Bva05g02095 358 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 346 IPR027725 -
Bva05g02095 358 Coils Coil 220 240 - -
Bva05g02095 358 Coils Coil 158 178 - -
Bva05g02095 358 PRINTS Heat shock factor (HSF) domain signature 42 65 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 PRINTS Heat shock factor (HSF) domain signature 93 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 PRINTS Heat shock factor (HSF) domain signature 80 92 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 Pfam HSF-type DNA-binding 42 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-6B 8 346 - -
Bva05g02095 358 ProSitePatterns HSF-type DNA-binding domain signature. 81 105 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 SMART hsfneu3 38 131 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva05g02095 358 Gene3D - 34 132 IPR036388 -
Bva05g02095 358 SUPERFAMILY "Winged helix" DNA-binding domain 38 131 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva05g02095 Bva-Chr5 15868679 15870286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva05g02095 28 357 HSF AT3G22830 57.983 2.35e-136 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva05g02095 HSF_DNA-bind 1.9e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva05g02095 K09419 - qsu:112016413 444.891
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g02095 05 15868679 15870286 Bva05g02095 05 15868679 15870286 ECH